RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ZBED5Q49AG3 693 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 CST9Q5W186 159 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF598Q86UK7 904 aaKnown RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 TTC29Q8NA56 475 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 KLHL25Q9H0H3 589 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 TUBA8Q9NY65 449 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 CACNB4O00305 520 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 TYRP14679 529 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 EFNA1P20827 205 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 HTR1EP28566 365 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF846Q147U1 533 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 SLC14A2Q15849 920 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 GPAT3Q53EU6 434 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 PLEKHS1Q5SXH7 462 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 DEF8Q6ZN54 512 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 CXorf40BQ96DE9 158 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 FNDC11Q9BVV2 318 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 OSER1Q9NX31 292 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF232Q9UNY5 417 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 SH3GLB1Q9Y371 365 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 INSL6Q9Y581 213 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 FADS2O95864 444 aaKnown RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ALDH3A2P51648 485 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 MAPK12P53778 367 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 MS4A2Q01362 244 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 RBM48Q5RL73 367 aaKnown RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ZBTB46Q86UZ6 589 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 THOC6Q86W42 341 aaKnown RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 CYB5D2Q8WUJ1 264 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 RPS6KB2Q9UBS0 482 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 RAPGEFL1Q9UHV5 662 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ERGIC3Q9Y282 383 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ACTL7AQ9Y615 435 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ISM1B1AKI9 464 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 AP2A2O94973 939 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 TSPAN19P0C672 248 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 HSD17B1P14061 328 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 CTSKP43235 329 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 TM4SF4P48230 202 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 CLCN2P51788 898 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 CDH15P55291 814 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ADAM17P78536 824 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 DSC1Q08554 894 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 DUOXA1Q1HG43 343 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 GALNT18Q6P9A2 607 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 GIPC3Q8TF64 312 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 SLC22A17Q8WUG5 538 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 TRIT1Q9H3H1 467 aaKnown RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 OAS3Q9Y6K5 1087 aaKnown RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 CCNDBP1O95273 360 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 NADKO95544 446 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-220ENST00000477528 IFNW1P05000 195 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 ENGP17813 658 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 PTX3P26022 381 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-220ENST00000477528 SPIN4Q56A73 249 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 FAM26DQ5JW98 314 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF438Q7Z4V0 828 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 ERI1Q8IV48 349 aaKnown RBP14.28□□□□□ -0.12
HDAC6-220ENST00000477528 PIK3C3Q8NEB9 887 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 FAM81AQ8TBF8 368 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 NUS1Q96E22 293 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 CREG1O75629 220 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 APODP05090 189 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 KCNA5P22460 613 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 CPOXP36551 454 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 MAGEA12P43365 314 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 ATP6AP1Q15904 470 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 IFI44LQ53G44 452 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 PTCHD4Q6ZW05 846 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 C16orf62Q7Z3J2 963 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 OR52B6Q8NGF0 335 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 COL26A1Q96A83 441 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 CASD1Q96PB1 797 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 SDR39U1Q9NRG7 319 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-220ENST00000477528 SEMA3GQ9NS98 782 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 GSRP00390 522 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 PAICSP22234 425 aaKnown RBP14.28□□□□□ -0.12
HDAC6-220ENST00000477528 SLC6A4P31645 630 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 OLR1P78380 273 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 MGAT3Q09327 533 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 RAB33AQ14088 237 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 DENND5AQ6IQ26 1287 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF655Q8N720 491 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-220ENST00000477528 RAB2BQ8WUD1 216 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 ABHD8Q96I13 439 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 WDR12Q9GZL7 423 aaKnown RBP14.28□□□□□ -0.12
HDAC6-220ENST00000477528 SLC27A6Q9Y2P4 619 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 PCDHB3Q9Y5E6 796 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 COL4A5P29400 1685 aa14.28□□□□□ -0.12
HDAC6-220ENST00000477528 H3BSA7 217 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 K7ERQ8 282 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 TNFRSF10BO14763 440 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 PCCBP05166 539 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 ATXN1LP0C7T5 689 aaKnown RBP14.27□□□□□ -0.12
HDAC6-220ENST00000477528 ALOX12P18054 663 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF140P52738 457 aaPredicted RBP14.27□□□□□ -0.12
HDAC6-220ENST00000477528 UBE3AQ05086 875 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 KCNC3Q14003 757 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 KCTD21Q4G0X4 260 aa14.27□□□□□ -0.12
HDAC6-220ENST00000477528 PPP4R4Q6NUP7 873 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms