RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 HERC4Q5GLZ8 1057 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 EPHA10Q5JZY3 1008 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 LDLRAP1Q5SW96 308 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ASPHD1Q5U4P2 390 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PRR27Q6MZM9 219 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 B3GNT6Q6ZMB0 384 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 TMEM126BQ8IUX1 230 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 CROCCP3Q8IVE0 287 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 FAM114A1Q8IWE2 563 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 KLHDC8AQ8IYD2 350 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 C1orf87Q8N0U7 546 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PAPD5Q8NDF8 572 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 VANGL1Q8TAA9 524 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PPP4R1Q8TF05 950 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 SLC35F5Q8WV83 523 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 FIG4Q92562 907 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 DPF1Q92782 380 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 TUBGCP3Q96CW5 907 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 MRPL38Q96DV4 380 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 MTERF3Q96E29 417 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ALG14Q96F25 216 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ZNF582Q96NG8 517 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 GFM1Q96RP9 751 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 SLX1AQ9BQ83 275 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 C16orf70Q9BSU1 422 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 QTRT1Q9BXR0 403 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PRRG4Q9BZD6 226 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PUS3Q9BZE2 481 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 SEMA4CQ9C0C4 833 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 FAM234AQ9H0X4 552 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 R3HDMLQ9H3Y0 253 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 RIOX1Q9H6W3 641 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 MAP6D1Q9H9H5 199 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 CDH20Q9HBT6 801 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 HHATLQ9HCP6 504 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 CNGB3Q9NQW8 809 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PNPLA3Q9NST1 481 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 FAM212BQ9NTI7 297 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 OSER1Q9NX31 292 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 TXNDC16Q9P2K2 825 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 TRIM10Q9UDY6 481 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 DNPEPQ9ULA0 475 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ACSL5Q9ULC5 683 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PLEKHA6Q9Y2H5 1048 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 TMEM184BQ9Y519 407 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.03□□□□□ -1.761e-11■■■□□ 17.9
VPS13D-207ENST00000476169 SQORQ9Y6N5 450 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 U3KQV3 271 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 NCANO14594 1321 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 A0A1W2PPC1 479 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 FEZF1A0PJY2 475 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 FAM149AA5PLN7 773 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 FAM90A10PA6NDY2 464 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 TO15178 435 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 TLX3O43711 291 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 MTX2O75431 263 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 GMNNO75496 209 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 DDNO94850 711 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 EPN2O95208 641 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 ADCY5O95622 1261 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 GAS8O95995 478 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 STAG3L1P0CL83 205 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CYP19A1P11511 503 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CHRNB2P17787 502 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CYP2A7P20853 494 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 ACP1P24666 158 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 MARCKSP29966 332 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 BDKRB2P30411 391 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 GSDMDP57764 484 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 TGFB2P61812 414 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 SPP2Q13103 211 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 TSTA3Q13630 321 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 INPP5JQ15735 1006 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CARTPTQ16568 116 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 SYT16Q17RD7 645 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 USH1GQ495M9 461 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 LACTB2Q53H82 288 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 ATAD3BQ5T9A4 648 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 FAM46CQ5VWP2 391 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CENPPQ6IPU0 288 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 SLC18B1Q6NT16 456 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 KCTD18Q6PI47 426 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 DEF8Q6ZN54 512 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 ZNF534Q76KX8 674 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 SHFQ7M4L6 423 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 RD3Q7Z3Z2 195 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 ARHGAP22Q7Z5H3 698 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 PATL1Q86TB9 770 aaKnown RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 AMZ2Q86W34 360 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 BEST3Q8N1M1 668 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 RYBPQ8N488 228 aaPredicted RBP4.02□□□□□ -1.77
VPS13D-207ENST00000476169 HMGCLL1Q8TB92 370 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 GPT2Q8TD30 523 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 TMEM174Q8WUU8 243 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 CKAP2Q8WWK9 683 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 C14orf79Q96F83 325 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 ZFYVE19Q96K21 471 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 TTC25Q96NG3 672 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 GFI1Q99684 422 aa4.02□□□□□ -1.77
VPS13D-207ENST00000476169 SSX3Q99909 188 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms