RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 K7ENM7 598 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 EXTL3O43909 919 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 KRT5P13647 590 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 PTMSP20962 102 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 MNDAP41218 407 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 MAZP56270 477 aaKnown RBP5.6□□□□□ -1.51
SMC5-203ENST00000475540 HSPB3Q12988 150 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 TOMM20Q15388 145 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 SGSM1Q2NKQ1 1148 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 TRIM65Q6PJ69 517 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 RAB42Q8N4Z0 105 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 ZNF614Q8N883 585 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 SPDL1Q96EA4 605 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 RAD9AQ99638 391 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 MCRIP2Q9BUT9 160 aaKnown RBP5.6□□□□□ -1.51
SMC5-203ENST00000475540 CRNNQ9UBG3 495 aaPredicted RBP5.6□□□□□ -1.51
SMC5-203ENST00000475540 DDX25Q9UHL0 483 aaKnown RBP5.6□□□□□ -1.51
SMC5-203ENST00000475540 GRID1Q9ULK0 1009 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 KAT6BQ8WYB5 2073 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 KHDRBS3O75525 346 aaKnown RBP5.59□□□□□ -1.51
SMC5-203ENST00000475540 GPIP06744 558 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 DANCRP0C864 163 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 IGHV4-31P0DP07 118 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 DPEP1P16444 411 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 NNMTP40261 264 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 LIG4P49917 911 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 NUCB1Q02818 461 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 ODF4Q2M2E3 257 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 LCE1FQ5T754 118 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 C11orf63Q6NUN7 778 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 BRINP3Q76B58 766 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 RTN4RL2Q86UN3 420 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 MYPOPQ86VE0 399 aaPredicted RBP5.59□□□□□ -1.51
SMC5-203ENST00000475540 ZNF595Q8IYB9 648 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 CFAP61Q8NHU2 1237 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 ARHGAP45Q92619 1136 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 NXNL1Q96CM4 212 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 TRIM51Q9BSJ1 452 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 FUCA2Q9BTY2 467 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 GOLPH3LQ9H4A5 285 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 GKN1Q9NS71 199 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 RNF186Q9NXI6 227 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 PADI2Q9Y2J8 665 aa5.59□□□□□ -1.51
SMC5-203ENST00000475540 MSGN1A6NI15 193 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 H7C423 109 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 ZFAND5O76080 213 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 SMIM18P0DKX4 95 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 RPL21P46778 160 aaKnown RBP5.58□□□□□ -1.52
SMC5-203ENST00000475540 TAF6P49848 677 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 KLHL26Q53HC5 615 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 SYT14P1Q58G82 188 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 TMPRSS11BQ86T26 416 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 KIRREL3Q8IZU9 778 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 AVL9Q8NBF6 648 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 MAPK1IP1LQ8NDC0 245 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 OR11H4Q8NGC9 324 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 OR52N5Q8NH56 324 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 CLEC7AQ9BXN2 247 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 TRIM15Q9C019 465 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 KLHL4Q9C0H6 718 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 ATP13A3Q9H7F0 1226 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 PPANQ9NQ55 473 aaKnown RBP5.58□□□□□ -1.52
SMC5-203ENST00000475540 P4HTMQ9NXG6 502 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 TAB2Q9NYJ8 693 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 TRIM17Q9Y577 477 aa5.58□□□□□ -1.52
SMC5-203ENST00000475540 IGLV7-46A0A075B6I9 117 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 A0A0J9YWU9 116 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 hCG_1809904A0A1W2PP81 198 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 A0A1W2PPE2 198 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 A0A1W2PR64 198 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 FEZF1A0PJY2 475 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 AHCYL1O43865 530 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 TOMM70O94826 608 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 PGM3O95394 542 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 ABCB1P08183 1280 aaPredicted RBP5.57□□□□□ -1.52
SMC5-203ENST00000475540 LINGO3P0C6S8 592 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 CDH3P22223 829 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 JAK1P23458 1154 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 PTPN3P26045 913 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 MTHFRP42898 656 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 GARNL3Q5VVW2 1013 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 ATL1Q8WXF7 558 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 SYN2Q92777 582 aaPredicted RBP5.57□□□□□ -1.52
SMC5-203ENST00000475540 ABHD1Q96SE0 405 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 SYT11Q9BT88 431 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 CCDC106Q9BWC9 280 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 APOL6Q9BWW8 343 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 Q9N2K0 584 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 HAO2Q9NYQ3 351 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 WDR37Q9Y2I8 494 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 TTLL3Q9Y4R7 772 aa5.57□□□□□ -1.52
SMC5-203ENST00000475540 MAGED1Q9Y5V3 778 aaPredicted RBP5.57□□□□□ -1.52
SMC5-203ENST00000475540 ENO4A6NNW6 628 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 DCXO43602 365 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 STARD3NLO95772 234 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 PDLIM3Q53GG5 364 aaPredicted RBP5.56□□□□□ -1.52
SMC5-203ENST00000475540 BMP2KLQ5H9B9 411 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 SPDYCQ5MJ68 293 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 FAM198BQ6UWH4 519 aa5.56□□□□□ -1.52
SMC5-203ENST00000475540 HOGA1Q86XE5 327 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms