RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 RAD51CO43502 376 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 USP1O94782 785 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 SEC31AO94979 1220 aaKnown RBP14.63□□□□□ -0.07
VARS-223ENST00000474643 RPN2P04844 631 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 HBQ1P09105 142 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 ST6GAL1P15907 406 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 PGAM1P18669 254 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 NR1D1P20393 614 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 EIF3BP55884 814 aaKnown RBP14.63□□□□□ -0.07
VARS-223ENST00000474643 ARL4CP56559 192 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 GPS2Q13227 327 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 HIF1AQ16665 826 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 LONRF1Q17RB8 773 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 COLEC12Q5KU26 742 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 RNF187Q5TA31 235 aaPredicted RBP14.63□□□□□ -0.07
VARS-223ENST00000474643 NEPROQ6NW34 567 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 SPESP1Q6UW49 350 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 EFCAB3Q8N7B9 438 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 ENDOVQ8N8Q3 282 aaKnown RBP14.63□□□□□ -0.07
VARS-223ENST00000474643 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.63□□□□□ -0.073e-8■■■■■ 66.7
VARS-223ENST00000474643 OR5AR1Q8NGP9 310 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 GABPB2Q8TAK5 448 aaPredicted RBP14.63□□□□□ -0.07
VARS-223ENST00000474643 SIGLEC10Q96LC7 697 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 C17orf62Q9BQA9 187 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 SLC25A23Q9BV35 468 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 IL1RAPL1Q9NZN1 696 aa14.63□□□□□ -0.07
VARS-223ENST00000474643 ISM1B1AKI9 464 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 BTN3A3O00478 584 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 BANF1O75531 89 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 DNAJB5O75953 348 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 PVRP15151 417 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 IVDP26440 423 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 FMO4P31512 558 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 MAGEA3P43357 314 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 RPL21P46778 160 aaKnown RBP14.62□□□□□ -0.07
VARS-223ENST00000474643 CCL11P51671 97 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 TMED2Q15363 201 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 HP1BP3Q5SSJ5 553 aaPredicted RBP14.62□□□□□ -0.07
VARS-223ENST00000474643 ZNF470Q6ECI4 717 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 HIBCHQ6NVY1 386 aaPredicted RBP14.62□□□□□ -0.07
VARS-223ENST00000474643 TTC23LQ6PF05 361 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 NAPRTQ6XQN6 538 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 LRRC6Q86X45 466 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 APLFQ8IW19 511 aaPredicted RBP14.62□□□□□ -0.07
VARS-223ENST00000474643 SYTL1Q8IYJ3 562 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 DSELQ8IZU8 1212 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 C19orf47Q8N9M1 422 aaKnown RBP14.62□□□□□ -0.07
VARS-223ENST00000474643 OR1L3Q8NH93 324 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 CFAP61Q8NHU2 1237 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 CALML6Q8TD86 181 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 SKA2Q8WVK7 121 aaPredicted RBP14.62□□□□□ -0.07
VARS-223ENST00000474643 CFAP36Q96G28 342 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 PANX3Q96QZ0 392 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 RUFY1Q96T51 708 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 TCF12Q99081 682 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 EBNA1BP2Q99848 306 aaKnown RBP14.62□□□□□ -0.07
VARS-223ENST00000474643 ERP44Q9BS26 406 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 NAT9Q9BTE0 207 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 RAB17Q9H0T7 212 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 TXLNGQ9NUQ3 528 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 VPS9D1Q9Y2B5 631 aa14.62□□□□□ -0.07
VARS-223ENST00000474643 IQCF5A8MTL0 148 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 OR2B3O76000 313 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 TTC4O95801 387 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 APOA4P06727 396 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 RAB40ALP0C0E4 278 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 OGNP20774 298 aaKnown RBP14.61□□□□□ -0.07
VARS-223ENST00000474643 ARNTP27540 789 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 HSPA14Q0VDF9 509 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 ABRQ12979 859 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 CHAF1BQ13112 559 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 IL10RAQ13651 578 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 IGFBP7Q16270 282 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 PRAMEF17Q5VTA0 474 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 C8orf74Q6P047 294 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 TRIM73Q86UV7 250 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 RAB43Q86YS6 212 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 TBC1D21Q8IYX1 336 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 KRT222Q8N1A0 295 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 TCTN2Q96GX1 697 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 PWWP2AQ96N64 755 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 LRFN5Q96NI6 719 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 TRAPPC9Q96Q05 1148 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 DPH2Q9BQC3 489 aaPredicted RBP14.61□□□□□ -0.07
VARS-223ENST00000474643 FAM167BQ9BTA0 163 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 NLNQ9BYT8 704 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 PITPNM3Q9BZ71 974 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 FAM129AQ9BZQ8 928 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 ING2Q9H160 280 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 CCDC68Q9H2F9 335 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 AKIRIN1Q9H9L7 192 aaPredicted RBP14.61□□□□□ -0.07
VARS-223ENST00000474643 PPANQ9NQ55 473 aaKnown RBP14.61□□□□□ -0.07
VARS-223ENST00000474643 OR6C2Q9NZP2 312 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 NDOR1Q9UHB4 597 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 ICKQ9UPZ9 632 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 CHMP2BQ9UQN3 213 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 CRYL1Q9Y2S2 319 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 AP1M2Q9Y6Q5 423 aa14.61□□□□□ -0.07
VARS-223ENST00000474643 A0A0J9YY10 115 aa14.6□□□□□ -0.07
VARS-223ENST00000474643 ZCWPW2A0A1B0GU75 182 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms