RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 DPH2Q9BQC3 489 aaPredicted RBP17.88■□□□□ 0.45
COL7A1-209ENST00000474432 TSSK1BQ9BXA7 367 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 GALPQ9UBC7 116 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 GNPTGQ9UJJ9 305 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 SNX7Q9UNH6 387 aa17.88■□□□□ 0.45
COL7A1-209ENST00000474432 RUVBL2Q9Y230 463 aaKnown RBP17.88■□□□□ 0.45
COL7A1-209ENST00000474432 NDUFS3O75489 264 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 CEACAM4O75871 244 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 C1orf105O95561 183 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 VPS41P49754 854 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 TERF1P54274 439 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 GPS1Q13098 491 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 PAPD7Q5XG87 772 aaKnown RBP17.87■□□□□ 0.45
COL7A1-209ENST00000474432 FCRL6Q6DN72 434 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 CENPUQ71F23 418 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 HOOK3Q86VS8 718 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 SPNS2Q8IVW8 549 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 AGGF1Q8N302 714 aaeCLIP17.87■□□□□ 0.45
COL7A1-209ENST00000474432 DENND1AQ8TEH3 1009 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 ING2Q9H160 280 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 SLC22A11Q9NSA0 550 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 DHCR7Q9UBM7 475 aaKnown RBP17.87■□□□□ 0.45
COL7A1-209ENST00000474432 AP1M2Q9Y6Q5 423 aa17.87■□□□□ 0.45
COL7A1-209ENST00000474432 RASGRF2O14827 1237 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 NIPSNAP2O75323 286 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 KRT14P02533 472 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 HBQ1P09105 142 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 EIF3BP55884 814 aaKnown RBP17.86■□□□□ 0.45
COL7A1-209ENST00000474432 FOXL2P58012 376 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 CYP1B1Q16678 543 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 C1orf189Q5VU69 101 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 KIAA0930Q6ICG6 404 aaPredicted RBP17.86■□□□□ 0.45
COL7A1-209ENST00000474432 TAX1BP1Q86VP1 789 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 REXO1L1PQ8IX06 675 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 GPR135Q8IZ08 494 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 ZNF655Q8N720 491 aaPredicted RBP17.86■□□□□ 0.45
COL7A1-209ENST00000474432 PANX3Q96QZ0 392 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 EURLQ9NYK6 297 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 PLCL2Q9UPR0 1127 aa17.86■□□□□ 0.45
COL7A1-209ENST00000474432 PCDHGA9Q9Y5G4 932 aaKnown RBP17.86■□□□□ 0.45
COL7A1-209ENST00000474432 ZSCAN9O15535 394 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-209ENST00000474432 KDM1AO60341 852 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 S1PR4O95977 384 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 RPN2P04844 631 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 ITGAXP20702 1163 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 FMO4P31512 558 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 BDKRB1P46663 353 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 CCL11P51671 97 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 ADARP55265 1226 aaKnown RBP17.85■□□□□ 0.45
COL7A1-209ENST00000474432 TMED2Q15363 201 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 MRPL14Q6P1L8 145 aaKnown RBP17.85■□□□□ 0.45
COL7A1-209ENST00000474432 MCATQ8IVS2 390 aaKnown RBP17.85■□□□□ 0.45
COL7A1-209ENST00000474432 ZNF285Q96NJ3 590 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 TCF12Q99081 682 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 ENAMQ9NRM1 1142 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 IL1RAPL1Q9NZN1 696 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 JRKLQ9Y4A0 524 aa17.85■□□□□ 0.45
COL7A1-209ENST00000474432 PCM1Q15154 2024 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 A0A1W2PPV9 198 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 KPNA5O15131 536 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 MATN4O95460 622 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 F7P08709 466 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-209ENST00000474432 AGXTP21549 392 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 COILP38432 576 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-209ENST00000474432 YBX1P67809 324 aaKnown RBP17.84■□□□□ 0.45
COL7A1-209ENST00000474432 ATP1A4Q13733 1029 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 ARMC3Q5W041 872 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 MRNIPQ6NTE8 343 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 TLDC1Q6P9B6 456 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 FIGLAQ6QHK4 219 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 OTOAQ7RTW8 1153 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 HMGCLL1Q8TB92 370 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 PROKR1Q8TCW9 393 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 COG1Q8WTW3 980 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 N4BP2L2Q92802 583 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-209ENST00000474432 MAGOHBQ96A72 148 aaKnown RBP17.84■□□□□ 0.45
COL7A1-209ENST00000474432 MIB2Q96AX9 1013 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 RAD51AP1Q96B01 352 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 PBKQ96KB5 322 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 DHRS4Q9BTZ2 278 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 SLC25A23Q9BV35 468 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 SLC7A5P2Q9GIP4 190 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 ACSS2Q9NR19 701 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 PLAAQ9Y263 795 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 CRYL1Q9Y2S2 319 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 MED16Q9Y2X0 877 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 LRRK2Q5S007 2527 aa17.84■□□□□ 0.45
COL7A1-209ENST00000474432 DOPEY2Q9Y3R5 2298 aa17.83■□□□□ 0.45
COL7A1-209ENST00000474432 ZCWPW2A0A1B0GU75 182 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 CLEC18AA5D8T8 446 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 CYSRT1A8MQ03 144 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 NRP2O60462 931 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 CTSVO60911 334 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 ONECUT2O95948 504 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 MLNP12872 115 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 OGNP20774 298 aaKnown RBP17.83■□□□□ 0.44
COL7A1-209ENST00000474432 PSMB5P28074 263 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 GRIA3P42263 894 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 MAGEA3P43357 314 aa17.83■□□□□ 0.44
COL7A1-209ENST00000474432 ANKRD20A4Q4UJ75 823 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms