RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 IPO13O94829 963 aaKnown RBP9.21□□□□□ -0.94
MCF2L-223ENST00000473345 TPM3P06753 285 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 PSMB5P28074 263 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 PKLRP30613 574 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 SOX11P35716 441 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 ST13P50502 369 aaKnown RBP9.21□□□□□ -0.94
MCF2L-223ENST00000473345 ADORA2A-AS1P86434 159 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 PMP22Q01453 160 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 MFAP5Q13361 173 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 SLC5A12Q1EHB4 618 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 CCSMST1Q4G0I0 132 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 ANKRD20A2Q5SQ80 823 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 ANKRD20A1Q5TYW2 823 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 ANKRD20A3Q5VUR7 823 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 B3GNTL1Q67FW5 361 aaPredicted RBP9.21□□□□□ -0.94
MCF2L-223ENST00000473345 KCTD11Q693B1 232 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 FRMPD2BQ6IN97 320 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 TLDC1Q6P9B6 456 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 ARHGEF18Q6ZSZ5 1173 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 PRSS58Q8IYP2 241 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 OR1N1Q8NGS0 311 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 DCUN1D1Q96GG9 259 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 LHPPQ9H008 270 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 SLC26A1Q9H2B4 701 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 PLCL2Q9UPR0 1127 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 ASF1AQ9Y294 204 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 TDRKHQ9Y2W6 561 aaKnown RBP9.21□□□□□ -0.94
MCF2L-223ENST00000473345 ALG6Q9Y672 507 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 DCHS2Q6V1P9 2916 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 LOC105369274A0A096LPK9 316 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 LOC102723532A0A0G2JNH3 316 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 A0A1B0GX78 115 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 KLHL33A6NCF5 533 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 C2orf81A6NN90 581 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ISM1B1AKI9 464 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 H7C0S8 307 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 IFRD1O00458 451 aaPredicted RBP9.2□□□□□ -0.94
MCF2L-223ENST00000473345 PYGMP11217 842 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ITGALP20701 1170 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 FOXN2P32314 431 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 SHMT2P34897 504 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 KIR3DL1P43629 444 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 GEMP55040 296 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 CSE1LP55060 971 aaKnown RBP9.2□□□□□ -0.94
MCF2L-223ENST00000473345 KLC1Q07866 573 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 RPA4Q13156 261 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ART3Q13508 389 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 SEMA3AQ14563 771 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 TCEAL1Q15170 157 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 TFDP3Q5H9I0 405 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 AGAP7PQ5VUJ5 663 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ATG9BQ674R7 924 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 BBS12Q6ZW61 710 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 OR4N4Q8N0Y3 316 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 OR5K2Q8NHB8 316 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ACTL9Q8TC94 416 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 TM9SF4Q92544 642 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 NR4A3Q92570 626 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 P3H4Q92791 437 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.2□□□□□ -0.949e-14■■■■■ 117.7
MCF2L-223ENST00000473345 FKBP10Q96AY3 582 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ULK4Q96C45 1275 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 CDKN2AIPNLQ96HQ2 116 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 AGAP4Q96P64 663 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 VAT1Q99536 393 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 NHEJ1Q9H9Q4 299 aaPredicted RBP9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ARNT2Q9HBZ2 717 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ZNF160Q9HCG1 818 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 CUTCQ9NTM9 273 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 TXLNGQ9NUQ3 528 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 OLAHQ9NV23 265 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 NLE1Q9NVX2 485 aaPredicted RBP9.2□□□□□ -0.94
MCF2L-223ENST00000473345 DDX56Q9NY93 547 aaKnown RBP9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ITGB1BP2Q9UKP3 347 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 TRHDEQ9UKU6 1024 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ANKRD12Q6UB98 2062 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 ZGRF1Q86YA3 2104 aa9.2□□□□□ -0.94
MCF2L-223ENST00000473345 POLQO75417 2590 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 C2CD3Q4AC94 2353 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 CCDC162PA2VCL2 907 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 IQCF5A8MTL0 148 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 DSCR3O14972 297 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 PSTPIP1O43586 416 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 METTL18O95568 372 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 COX6A1P12074 109 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 PSMA3P25788 255 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 HTR1EP28566 365 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 CCR7P32248 378 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 TNFSF10P50591 281 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 PER3P56645 1201 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 TFDP2Q14188 446 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 TLR1Q15399 786 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 ZNF630Q2M218 657 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-223ENST00000473345 TUBB8Q3ZCM7 444 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 VWA2Q5GFL6 755 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 RPUSD3Q6P087 351 aaKnown RBP9.19□□□□□ -0.94
MCF2L-223ENST00000473345 ISLR2Q6UXK2 745 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 TAS2R42Q7RTR8 314 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 KATNAL2Q8IYT4 538 aa9.19□□□□□ -0.94
MCF2L-223ENST00000473345 TBC1D21Q8IYX1 336 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms