RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 EPS8Q12929 822 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 TRAF3Q13114 568 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 LRIT3Q3SXY7 679 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 LDLRAP1Q5SW96 308 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 SBSNQ6UWP8 590 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 RTN4RL1Q86UN2 441 aaPredicted RBP13.69□□□□□ -0.22
ABCF3-210ENST00000473311 DENND1CQ8IV53 801 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 GTF2H4Q92759 462 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 CCDC115Q96NT0 180 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 CDK5RAP1Q96SZ6 601 aaKnown RBP13.69□□□□□ -0.22
ABCF3-210ENST00000473311 MBOAT4Q96T53 435 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 EGFL8Q99944 293 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 DPY30Q9C005 99 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 IKZF5Q9H5V7 419 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 NSUN3Q9H649 340 aaKnown RBP13.69□□□□□ -0.22
ABCF3-210ENST00000473311 AKIP1Q9NQ31 210 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 DHRS7Q9Y394 339 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 ST14Q9Y5Y6 855 aa13.69□□□□□ -0.22
ABCF3-210ENST00000473311 RAD51BO15315 384 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 HS6ST1O60243 411 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PRKD3O94806 890 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 IGHA2P01877 340 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 SLC11A2P49281 568 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 HMGCS1Q01581 520 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 DUSP4Q13115 394 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PGS1Q32NB8 556 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 INAVAQ3KP66 663 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PTRHD1Q6GMV3 140 aaKnown RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 LINGO4Q6UY18 593 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 APOL5Q9BWW9 433 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 TRIT1Q9H3H1 467 aaKnown RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 IL20Q9NYY1 176 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 SNX5Q9Y5X3 404 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 DGKBQ9Y6T7 804 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 CXCR6O00574 342 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PRMT5O14744 637 aaPredicted RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 SNPHO15079 494 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 CYBAP13498 195 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 AGXTP21549 392 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PSMA3P25788 255 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 GGT5P36269 586 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 COPZ1P61923 177 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 CD47Q08722 323 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 TRIM32Q13049 653 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 KIAA0040Q15053 153 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 KCNA10Q16322 511 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 CTU2Q2VPK5 515 aaKnown RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 SGO1Q5FBB7 561 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 SPANXN4Q5MJ08 99 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 GTF2IRD2BQ6EKJ0 949 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 C17orf99Q6UX52 265 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 GTF2IRD2Q86UP8 949 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 STK40Q8N2I9 435 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PARP8Q8N3A8 854 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 CLIP4Q8N3C7 705 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 RBM4BQ9BQ04 359 aaKnown RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 FEM1AQ9BSK4 669 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 RBM4Q9BWF3 364 aaKnown RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 FUNDC2Q9BWH2 189 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 CCDC90BQ9GZT6 254 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.229e-6■■■■■ 32.4
ABCF3-210ENST00000473311 C12orf4Q9NQ89 552 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 ZNF229Q9UJW7 825 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 BAG5Q9UL15 447 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 INVSQ9Y283 1065 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PKP3Q9Y446 797 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 A6NL46 340 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 A8MU76 341 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 FAM25AB3EWG3 89 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 FAM25CB3EWG5 89 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 FAM25GB3EWG6 89 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PTGES3LE9PB15 166 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 H3BNC9 293 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 RGS14O43566 566 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 MSH3P20585 1137 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PRKACGP22612 351 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 RRM2P31350 389 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 ATP5C1P36542 298 aaKnown RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 GDF5P43026 501 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 SGSHP51688 502 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 MLLT10P55197 1068 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 C5orf22Q49AR2 442 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 CRTC3Q6UUV7 619 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 SLC24A5Q71RS6 500 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 C16orf59Q7L2K0 433 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 RBM23Q86U06 439 aaKnown RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 PHACTR4Q8IZ21 702 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 EID3Q8N140 333 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 SVOPLQ8N434 492 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 GPR63Q9BZJ6 419 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 GPR62Q9BZJ7 368 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 CIPCQ9C0C6 399 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 B3GNT4Q9C0J1 378 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 P2RY12Q9H244 342 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 FARSBQ9NSD9 589 aaKnown RBP13.68□□□□□ -0.22
ABCF3-210ENST00000473311 EXD2Q9NVH0 621 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 KLQ9UEF7 1012 aa13.68□□□□□ -0.22
ABCF3-210ENST00000473311 ENPP5Q9UJA9 477 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms