RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 THOC6Q86W42 341 aaKnown RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 HORMAD1Q86X24 394 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 ZFAND4Q86XD8 727 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 DCUN1D3Q8IWE4 304 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 RAB42Q8N4Z0 105 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 DCBLD1Q8N8Z6 715 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 TP53I13Q8NBR0 393 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 PLA2G15Q8NCC3 412 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 GLB1L3Q8NCI6 653 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 OR2T11Q8NH01 316 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 OR56A3Q8NH54 315 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 OR14C36Q8NHC7 312 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 SELENOMQ8WWX9 145 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 SPDL1Q96EA4 605 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 SIPA1Q96FS4 1042 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 ANKRD27Q96NW4 1050 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 NPAS2Q99743 824 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 PHF7Q9BWX1 381 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 C1QTNF2Q9BXJ5 285 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 SLC17A9Q9BYT1 436 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 UBE2ZQ9H832 354 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 KCNK12Q9HB15 430 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 SPAG4Q9NPE6 437 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 C1orf109Q9NX04 203 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 SPATA7Q9P0W8 599 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 STOML1Q9UBI4 398 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 GIMAP2Q9UG22 337 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 SERGEFQ9UGK8 458 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 LEF1Q9UJU2 399 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 CROTQ9UKG9 612 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 MMP17Q9ULZ9 603 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 TMED5Q9Y3A6 229 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 RNF11Q9Y3C5 154 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 DYRK1BQ9Y463 629 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 POLR3HQ9Y535 204 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-205ENST00000469129 BRWD1Q9NSI6 2320 aa9.09□□□□□ -0.95
SMC1A-205ENST00000469129 PLXND1Q9Y4D7 1925 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 KCNE1BA0A087WTH5 132 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 A0A1W2PQF6 199 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 A0A1W2PQU0 124 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CCDC154A6NI56 674 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 H3BQ06 376 aaPredicted RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CACNB4O00305 520 aaPredicted RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CFLARO15519 480 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 KDM1AO60341 852 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 ADAM23O75077 832 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 EEDO75530 441 aaKnown RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 PDE5AO76074 875 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 C1orf105O95561 183 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 NPPAP01160 153 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 GNAZP19086 355 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 COL9A1P20849 921 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 JAK1P23458 1154 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 ITPKAP23677 461 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 IMPA1P29218 277 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 TRIM23P36406 574 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 POLR2JP52435 117 aaKnown RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CLNS1AP54105 237 aaKnown RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 KIAA1024LP59773 190 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 PFN3P60673 137 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 TBPL1P62380 186 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 PHEXP78562 749 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CHIT1Q13231 466 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 PRKG2Q13237 762 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 NAE1Q13564 534 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 LRP8Q14114 963 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 RCN1Q15293 331 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CPSF6Q16630 551 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 XKR6Q5GH73 641 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 PIGGQ5H8A4 983 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 PAGE2BQ5JRK9 111 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 SAMD4BQ5PRF9 694 aaKnown RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 FRG2Q64ET8 278 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 SCIMPQ6UWF3 145 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 Q6ZSR9 355 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 C11orf96Q7Z7L8 435 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 TRIM69Q86WT6 500 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 ZNF547Q8IVP9 402 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 SYTL1Q8IYJ3 562 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 SFRP1Q8N474 314 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 SLC44A3Q8N4M1 653 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 OR9I1Q8NGQ6 314 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 OR9A1PQ8NGU1 263 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 WDR60Q8WVS4 1066 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 FOXJ1Q92949 421 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 RAD51AP1Q96B01 352 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CCDC124Q96CT7 223 aaKnown RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 ERLEC1Q96DZ1 483 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CMTM7Q96FZ5 175 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 MED8Q96G25 268 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 METTL2AQ96IZ6 378 aaKnown RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CLPTM1LQ96KA5 538 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 FRG2BQ96QU4 278 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 PKP4Q99569 1192 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 HOPXQ9BPY8 73 aaPredicted RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 C1orf50Q9BV19 199 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 RAB11FIP5Q9BXF6 653 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 MKRN2Q9H000 416 aaKnown RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 ATG10Q9H0Y0 220 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 OR52A5Q9H2C5 316 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms