RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 B4GAT1O43505 415 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 DUX1O43812 170 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 KLK8O60259 260 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 RFPL3O75679 317 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 TOP3BO95985 862 aaKnown RBP14.72□□□□□ -0.05
NPHP4-205ENST00000466897 PROS1P07225 676 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 ANXA5P08758 320 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 IMPA1P29218 277 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 GLRBP48167 497 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 PNLIPRP1P54315 467 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 E2F1Q01094 437 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 CCDC153Q494R4 210 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 SULT1C3Q6IMI6 304 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 WDR74Q6RFH5 385 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-205ENST00000466897 CDHR3Q6ZTQ4 885 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 EXOC3L1Q86VI1 746 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 OOSP2Q86WS3 158 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 KLHDC8AQ8IYD2 350 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 C4orf33Q8N1A6 199 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 TMEM151AQ8N4L1 468 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 DEFB124Q8NES8 71 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 ZNF480Q8WV37 535 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 TBC1D10AQ9BXI6 508 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 UNKQ9C0B0 810 aaKnown RBP14.72□□□□□ -0.05
NPHP4-205ENST00000466897 CENPHQ9H3R5 247 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 ZNF358Q9NW07 568 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 OGFRQ9NZT2 677 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 TMEM216Q9P0N5 145 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 STOX2Q9P2F5 926 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-205ENST00000466897 XPR1Q9UBH6 696 aa14.72□□□□□ -0.05
NPHP4-205ENST00000466897 PTPRZ1P23471 2315 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-205ENST00000466897 MN1Q10571 1320 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-205ENST00000466897 ADAMTS20P59510 1910 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 E7ENX8 843 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 PRPF4O43172 522 aaKnown RBP eCLIP14.71□□□□□ -0.05
NPHP4-205ENST00000466897 TYROBPO43914 113 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 IPO13O94829 963 aaKnown RBP14.71□□□□□ -0.05
NPHP4-205ENST00000466897 FKBP9O95302 570 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 SYF2O95926 243 aaKnown RBP14.71□□□□□ -0.05
NPHP4-205ENST00000466897 MTHFD2P13995 350 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 CCND1P24385 295 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 CD1CP29017 333 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 ALDH4A1P30038 563 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 GGT5P36269 586 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 KCNC1P48547 511 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 OR1D5P58170 312 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 TAP2Q03519 686 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 KIR2DS3Q14952 304 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 N4BP2L1Q5TBK1 243 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-205ENST00000466897 METTL2BQ6P1Q9 378 aaKnown RBP14.71□□□□□ -0.05
NPHP4-205ENST00000466897 ZNF761Q86XN6 746 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-205ENST00000466897 LRRC56Q8IYG6 542 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-205ENST00000466897 ADGRF3Q8IZF5 1079 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 CARFQ8N187 725 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 LINC01555Q8NAE3 123 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 OR4E2Q8NGC2 313 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 RDH11Q8TC12 318 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 UBTD2Q8WUN7 234 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 SMPDL3AQ92484 453 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 SLC22A18Q96BI1 424 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 RHBDF1Q96CC6 855 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 LRRN3Q9H3W5 708 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 EMCNQ9ULC0 261 aa14.71□□□□□ -0.05
NPHP4-205ENST00000466897 CEP250Q9BV73 2442 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 A0A1W2PQM1 296 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 OR6C74A6NCV1 312 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 C2orf74A8MZ97 194 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 TK2O00142 265 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 PRICKLE3O43900 615 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-205ENST00000466897 PLIN3O60664 434 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 CPNE6O95741 557 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 PROCP04070 461 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 S100BP04271 92 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-205ENST00000466897 CHRM5P08912 532 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-205ENST00000466897 AMD1P17707 334 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 SLC18A1P54219 525 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 NFKB2Q00653 900 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 PRKAA1Q13131 559 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 RSPO4Q2I0M5 234 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-205ENST00000466897 AGTRAPQ6RW13 159 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 PLXDC1Q8IUK5 500 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 GOLGA6L1Q8N7Z2 621 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 OR56A3Q8NH54 315 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 RSC1A1Q92681 617 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 AHCYL2Q96HN2 611 aaKnown RBP14.7□□□□□ -0.06
NPHP4-205ENST00000466897 SCYL1Q96KG9 808 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 CD180Q99467 661 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 IQCGQ9H095 443 aaKnown RBP14.7□□□□□ -0.06
NPHP4-205ENST00000466897 XKR8Q9H6D3 395 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 CNOT10Q9H9A5 744 aaKnown RBP14.7□□□□□ -0.06
NPHP4-205ENST00000466897 UTP6Q9NYH9 597 aaKnown RBP14.7□□□□□ -0.06
NPHP4-205ENST00000466897 DLL3Q9NYJ7 618 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 PDP2Q9P2J9 529 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 MID2Q9UJV3 735 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 PTBP2Q9UKA9 531 aaKnown RBP14.7□□□□□ -0.06
NPHP4-205ENST00000466897 PLAGL1Q9UM63 463 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 PLLPQ9Y342 182 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 HEATR5BQ9P2D3 2071 aa14.7□□□□□ -0.06
NPHP4-205ENST00000466897 CFAP54Q96N23 3096 aa14.69□□□□□ -0.06
NPHP4-205ENST00000466897 PTPRBP23467 1997 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms