RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 COMMD4Q9H0A8 199 aa9.57□□□□□ -0.88
UFD1-205ENST00000459854 ATP13A1Q9HD20 1204 aa9.57□□□□□ -0.88
UFD1-205ENST00000459854 FAM149AA5PLN7 773 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 H3BNH8 94 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ZNF14P17017 642 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 CCR10P46092 362 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 PPP5CP53041 499 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TAS2R43P59537 309 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 PTGR1Q14914 329 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 DLG2Q15700 870 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 NDUFA9Q16795 377 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 GPRC6AQ5T6X5 926 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 IQCF2Q8IXL9 164 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 FAM136AQ96C01 138 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ARL5BQ96KC2 179 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SYNDIG1Q9H7V2 258 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 MINDY3Q9H8M7 445 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ZFP14Q9HCL3 533 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 PTPRHQ9HD43 1115 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SPG21Q9NZD8 308 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TMEM59LQ9UK28 342 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 PTPRJQ12913 1337 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SH3D21A4FU49 640 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TRIM64A6NGJ6 449 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TRIM64BA6NI03 449 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 FPGTO14772 594 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 AURKAO14965 403 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TGFB1I1O43294 461 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 GRID2O43424 1007 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SLC28A2O43868 658 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 NUAK1O60285 661 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TRIM3O75382 744 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 TRBC1P01850 177 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 CYP3A5P20815 502 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 LPOP22079 712 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 SERPINA4P29622 427 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 MATKP42679 507 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 RFX3P48380 749 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TAS2R40P59535 323 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 LAPTM5Q13571 262 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 COL13A1Q5TAT6 717 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 IL23RQ5VWK5 629 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 KLHL35Q6PF15 583 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 NPNTQ6UXI9 565 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SERPINA13PQ6UXR4 307 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SLC43A3Q8NBI5 491 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SETD6Q8TBK2 473 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TCEAL3Q969E4 200 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 EXOC2Q96KP1 924 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 PPM1MQ96MI6 270 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 BHLHE41Q9C0J9 482 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 FAM83DQ9H4H8 585 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 UNKLQ9H9P5 680 aaKnown RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 KAT6AQ92794 2004 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 LOC100130705A0A1B0GUX0 176 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 A0A1W2PPW3 197 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ZBTB42B2RXF5 422 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ENPP3O14638 875 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 PRKYO43930 277 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 PTPN1P18031 435 aaKnown RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 RPA4Q13156 261 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SEMA3AQ14563 771 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 BRMS1LQ5PSV4 323 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 HECTD2Q5U5R9 776 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 NCEH1Q6PIU2 408 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ZDHHC24Q6UX98 284 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ZNF730Q6ZMV8 503 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 IRF2BP1Q8IU81 584 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ZNF781Q8N8C0 355 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 FAM98AQ8NCA5 519 aaKnown RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 GLIS3Q8NEA6 775 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 OR10T2Q8NGX3 314 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TIFAQ96CG3 184 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 MFSD14AQ96MC6 490 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 AP1S3Q96PC3 154 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SLC39A3Q9BRY0 314 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ZNF350Q9GZX5 532 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 PRDM12Q9H4Q4 367 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SLC39A1Q9NY26 324 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ABI2Q9NYB9 513 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 OR12D3Q9UGF7 316 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 HTRA2O43464 458 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 RFPL1O75677 317 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 IRF1P10914 325 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 CLK3P49761 638 aaKnown RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 GDI2P50395 445 aaKnown RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 HLCSP50747 726 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 CSTF1Q05048 431 aaKnown RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 EFEMP1Q12805 493 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 GRSF1Q12849 480 aaKnown RBP eCLIP9.56□□□□□ -0.88
UFD1-205ENST00000459854 NFE2L1Q14494 772 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 C11orf91Q3C1V1 193 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 SFT2D3Q587I9 215 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ZC3H12AQ5D1E8 599 aaKnown RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 PNCKQ6P2M8 343 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 FAM122CQ6P4D5 195 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 CERS6Q6ZMG9 384 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 LINGO2Q7L985 606 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms