RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ACTL8Q9H568 366 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 ACTR5Q9H9F9 607 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 FAM60AQ9NP50 221 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 STARD5Q9NSY2 213 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 C20orf96Q9NUD7 363 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 IL1RAPL1Q9NZN1 696 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 SAR1BQ9Y6B6 198 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 TLN1Q9Y490 2541 aaKnown RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 SPTBP11277 2137 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 OR2B3O76000 313 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 MATN4O95460 622 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 PGAM1P18669 254 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 PTPN4P29074 926 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 RORAP35398 523 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 PTGIRP43119 386 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 KCNAB2Q13303 367 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 PRAMEF17Q5VTA0 474 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 CNSTQ6PJW8 725 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 DENND6AQ8IWF6 608 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL7A1-203ENST00000459756 FAM136AQ96C01 138 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 DPH2Q9BQC3 489 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-203ENST00000459756 NAT9Q9BTE0 207 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 SLC7A5P2Q9GIP4 190 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 CHST8Q9H2A9 424 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 CCDC68Q9H2F9 335 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 INTS7Q9NVH2 962 aaKnown RBP15.54■□□□□ 0.08
COL7A1-203ENST00000459756 KLHL42Q9P2K6 505 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 CIDEBQ9UHD4 219 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 POLHQ9Y253 713 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 NFS1Q9Y697 457 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 AP1M2Q9Y6Q5 423 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 FAM169AQ9Y6X4 670 aa15.54■□□□□ 0.08
COL7A1-203ENST00000459756 SNRNP200O75643 2136 aaKnown RBP15.53■□□□□ 0.08
COL7A1-203ENST00000459756 ZNF749O43361 778 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 FKBP9O95302 570 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 TTC4O95801 387 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 RAB40ALP0C0E4 278 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 SLC1A2P43004 574 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 GABRA4P48169 554 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 DR1Q01658 176 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 NFATC3Q12968 1075 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 CTBP1Q13363 440 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 TTLL9Q3SXZ7 439 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 SYVN1Q86TM6 617 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 KLHL7Q8IXQ5 586 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 SYTL1Q8IYJ3 562 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 C2orf73Q8N5S3 287 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-203ENST00000459756 HMGCLL1Q8TB92 370 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 KCNJ9Q92806 393 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 IL17FQ96PD4 163 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 FAM167BQ9BTA0 163 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 SLC25A18Q9H1K4 315 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 FBXO6Q9NRD1 293 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-203ENST00000459756 PCMTD2Q9NV79 361 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 GALPQ9UBC7 116 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 PLCL2Q9UPR0 1127 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 RUVBL2Q9Y230 463 aaKnown RBP15.53■□□□□ 0.08
COL7A1-203ENST00000459756 FARSAQ9Y285 508 aaKnown RBP15.53■□□□□ 0.08
COL7A1-203ENST00000459756 COMMD10Q9Y6G5 202 aa15.53■□□□□ 0.08
COL7A1-203ENST00000459756 HELZ2Q9BYK8 2649 aaKnown RBP15.53■□□□□ 0.08
COL7A1-203ENST00000459756 BSNQ9UPA5 3926 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 SPTA1P02549 2419 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 CDC14CA4D256 554 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 H3BMH7 237 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 CCDC188H7C350 402 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 SMAPO00193 183 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 FURINP09958 794 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 PLA2G2AP14555 144 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 MAGP20916 626 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 IVDP26440 423 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 PAFAH1B1P43034 410 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 BDKRB1P46663 353 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 CLCN7P51798 805 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 CRYMQ14894 314 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 MORF4L2Q15014 288 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 SF1Q15637 639 aaKnown RBP15.52■□□□□ 0.08
COL7A1-203ENST00000459756 UGT8Q16880 541 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 DEFB110Q30KQ9 67 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 HSP90AA5PQ58FG0 334 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 ACSBG2Q5FVE4 666 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 TLDC1Q6P9B6 456 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 NEK10Q6ZWH5 1172 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 KCNMB4Q86W47 210 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 DNAJC22Q8N4W6 341 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 LMNTD1Q8N9Z9 388 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 GABPB2Q8TAK5 448 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-203ENST00000459756 RUFY1Q96T51 708 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 EBNA1BP2Q99848 306 aaKnown RBP15.52■□□□□ 0.08
COL7A1-203ENST00000459756 NLNQ9BYT8 704 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 FAM114A2Q9NRY5 505 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 SPATA7Q9P0W8 599 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-203ENST00000459756 RNF14Q9UBS8 474 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 TSR3Q9UJK0 312 aaKnown RBP15.52■□□□□ 0.08
COL7A1-203ENST00000459756 FBXO5Q9UKT4 447 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 KCNMB2Q9Y691 235 aa15.52■□□□□ 0.08
COL7A1-203ENST00000459756 ZSCAN9O15535 394 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-203ENST00000459756 HCRTR1O43613 425 aa15.51■□□□□ 0.07
COL7A1-203ENST00000459756 PRICKLE3O43900 615 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms