RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 TRIM56Q9BRZ2 755 aaKnown RBP10.02□□□□□ -0.81
HDLBP-227ENST00000458564 MENTQ9BUN1 341 aa10.02□□□□□ -0.81
HDLBP-227ENST00000458564 OSBPL8Q9BZF1 889 aa10.02□□□□□ -0.81
HDLBP-227ENST00000458564 LUC7LQ9NQ29 371 aaKnown RBP10.02□□□□□ -0.81
HDLBP-227ENST00000458564 SMARCAL1Q9NZC9 954 aa10.02□□□□□ -0.81
HDLBP-227ENST00000458564 NXT1Q9UKK6 140 aaKnown RBP10.02□□□□□ -0.81
HDLBP-227ENST00000458564 HS3ST3B1Q9Y662 390 aa10.02□□□□□ -0.81
HDLBP-227ENST00000458564 PRSS21Q9Y6M0 314 aa10.02□□□□□ -0.81
HDLBP-227ENST00000458564 CROCCQ5TZA2 2017 aa10.02□□□□□ -0.81
HDLBP-227ENST00000458564 FBN2P35556 2912 aa10.02□□□□□ -0.81
HDLBP-227ENST00000458564 SNRNP200O75643 2136 aaKnown RBP10.01□□□□□ -0.81
HDLBP-227ENST00000458564 DOCK10Q96BY6 2186 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 CCDC88CQ9P219 2028 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 CCDC78A2IDD5 438 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 MROH6A6NGR9 719 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 ISM1B1AKI9 464 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 DSCR3O14972 297 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 LRRTM2O43300 516 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 STSP08842 583 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 PIM1P11309 404 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-227ENST00000458564 CTNNA2P26232 953 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 ELAVL4P26378 380 aaKnown RBP10.01□□□□□ -0.81
HDLBP-227ENST00000458564 FOXN2P32314 431 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 MAGEA1P43355 309 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 SPARCL1Q14515 664 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 TLR1Q15399 786 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 PARP6Q2NL67 630 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 TUBB8Q3ZCM7 444 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 SYTL3Q4VX76 610 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 DNAJC21Q5F1R6 531 aaKnown RBP10.01□□□□□ -0.81
HDLBP-227ENST00000458564 IRAK1BP1Q5VVH5 260 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 FCRL6Q6DN72 434 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 RPUSD3Q6P087 351 aaKnown RBP10.01□□□□□ -0.81
HDLBP-227ENST00000458564 DARS2Q6PI48 645 aaKnown RBP10.01□□□□□ -0.81
HDLBP-227ENST00000458564 KIRREL2Q6UWL6 708 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 TTLL10Q6ZVT0 673 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 MICALCLQ6ZW33 695 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 MCATQ8IVS2 390 aaKnown RBP10.01□□□□□ -0.81
HDLBP-227ENST00000458564 LINC01555Q8NAE3 123 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 SLC22A18Q96BI1 424 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 LHPPQ9H008 270 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 EPS8L2Q9H6S3 715 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 LRRC40Q9H9A6 602 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 IRAK4Q9NWZ3 460 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 CDC23Q9UJX2 597 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 TDRKHQ9Y2W6 561 aaKnown RBP10.01□□□□□ -0.81
HDLBP-227ENST00000458564 PCDHA3Q9Y5H8 950 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 SVILO95425 2214 aa10.01□□□□□ -0.81
HDLBP-227ENST00000458564 ADGRG4Q8IZF6 3080 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 FITM1A5D6W6 292 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 VSTM2BA6NLU5 285 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 AKR1B15C9JRZ8 316 aaPredicted RBP10□□□□□ -0.81
HDLBP-227ENST00000458564 F8W8V4 182 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 TJP3O95049 919 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 FKBP9O95302 570 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 S1PR4O95977 384 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 OR56A5P0C7T3 313 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 ALAS2P22557 587 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 MSNP26038 577 aaKnown RBP10□□□□□ -0.81
HDLBP-227ENST00000458564 CDC16Q13042 620 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 TBX2Q13207 712 aaPredicted RBP10□□□□□ -0.81
HDLBP-227ENST00000458564 GRM7Q14831 915 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 POU6F1Q14863 301 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 P3H1Q32P28 736 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 ZC3H12BQ5HYM0 836 aaKnown RBP10□□□□□ -0.81
HDLBP-227ENST00000458564 TCTE1Q5JU00 501 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 DCUN1D3Q8IWE4 304 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 SLC22A15Q8IZD6 547 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 OR11G2Q8NGC1 345 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 DNAJB14Q8TBM8 379 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 MARVELD3Q96A59 401 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 VPS50Q96JG6 964 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 CALR3Q96L12 384 aaKnown RBP10□□□□□ -0.81
HDLBP-227ENST00000458564 FAM118BQ9BPY3 351 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 SEMA3GQ9NS98 782 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 CUTCQ9NTM9 273 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 INTS7Q9NVH2 962 aaKnown RBP10□□□□□ -0.81
HDLBP-227ENST00000458564 IL1RAPL1Q9NZN1 696 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 CTSFQ9UBX1 484 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 PLAGL1Q9UM63 463 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 OSGIN2Q9Y236 505 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 KLK4Q9Y5K2 254 aa10□□□□□ -0.81
HDLBP-227ENST00000458564 MDC1Q14676 2089 aaKnown RBP10□□□□□ -0.81
HDLBP-227ENST00000458564 A0A1B0GUH1 482 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 A0A1W2PQ72 361 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 HEATR9A2RTY3 570 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 ZG16O60844 167 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 ALOX12BO75342 701 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 GPC4O75487 556 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 METTL18O95568 372 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 RPN2P04844 631 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 PRF1P14222 555 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 TPH1P17752 444 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 CD9P21926 228 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 MFAP5Q13361 173 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 GRB7Q14451 532 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 BRD3Q15059 726 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 INAQ16352 499 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 ZNF324BQ6AW86 544 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-227ENST00000458564 FAM180AQ6UWF9 173 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms