RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PRNPP04156 253 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 SCN1BQ07699 218 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 MAPK14Q16539 360 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 MCCC2Q9HCC0 563 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 AURKAO14965 403 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 AKAP8O43823 692 aaKnown RBP19.27■□□□□ 0.68
SNX27-204ENST00000458013 S100A1P23297 94 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 XKP51811 444 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 DGKQP52824 942 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 OR2B6P58173 313 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 SYT16Q17RD7 645 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 ADNP2Q6IQ32 1131 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 SLC2A7Q6PXP3 512 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 FZD4Q9ULV1 537 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 FARSAQ9Y285 508 aaKnown RBP19.27■□□□□ 0.68
SNX27-204ENST00000458013 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 OAZ2O95190 189 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 HLA-DQB2P05538 268 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 ARL2P36404 184 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 RORCP51449 518 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 SYPL2Q5VXT5 272 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 USP43Q70EL4 1123 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 HMGN2P46Q86SG4 172 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 HERC2P3Q9BVR0 1158 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 MAGEE1Q9HCI5 957 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 PNPLA8Q9NP80 782 aa19.27■□□□□ 0.67
SNX27-204ENST00000458013 C2orf92A0A1B0GVN3 265 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 OR2AT4A6NND4 320 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 PITPNM1O00562 1244 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 CCNFP41002 786 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 DUSP28Q4G0W2 176 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 ZNF662Q6ZS27 426 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 MSANTD1Q6ZTZ1 278 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 NFKBIDQ8NI38 313 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 HMGB4Q8WW32 186 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 KLRG1Q96E93 195 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 BEX2Q9BXY8 128 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 SMG9Q9H0W8 520 aaKnown RBP19.26■□□□□ 0.67
SNX27-204ENST00000458013 BEX1Q9HBH7 125 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 ZNF639Q9UID6 485 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 OR12D2P58182 307 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 TMEM139Q8IV31 216 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 GAS2L1Q99501 681 aaPredicted RBP19.26■□□□□ 0.67
SNX27-204ENST00000458013 TRIM2Q9C040 744 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 FBXL3Q9UKT7 428 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 ADAMTS3O15072 1205 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 ENGP17813 658 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 OGFRL1Q5TC84 451 aaPredicted RBP19.26■□□□□ 0.67
SNX27-204ENST00000458013 PCDH19Q8TAB3 1148 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 SLC13A3Q8WWT9 602 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 TRMOQ9BU70 441 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 DKK3Q9UBP4 350 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 CCNOP22674 350 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 FOXN2P32314 431 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 MLLT3P42568 568 aaPredicted RBP19.26■□□□□ 0.67
SNX27-204ENST00000458013 LRRC32Q14392 662 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 FBXO22Q8NEZ5 403 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 METTL8Q9H825 291 aaKnown RBP19.26■□□□□ 0.67
SNX27-204ENST00000458013 C1orf109Q9NX04 203 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 GIN1Q9NXP7 522 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 MAU2Q9Y6X3 613 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 CD36P16671 472 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 ADAM8P78325 824 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 SPIN3Q5JUX0 258 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 OR4F3Q6IEY1 312 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 CNTD1Q8N815 330 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 ZNF611Q8N823 705 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 DPYSL5Q9BPU6 564 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 POMPQ9Y244 141 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 A0A0J9YVX5 310 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 CPED1A4D0V7 1026 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 GPR89AB7ZAQ6 455 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 VNN1O95497 513 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 POP4O95707 220 aaKnown RBP19.26■□□□□ 0.67
SNX27-204ENST00000458013 GPR89BP0CG08 455 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 SGCBQ16585 318 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 RFKQ969G6 155 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 TIMMDC1Q9NPL8 285 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 MAN2B2Q9Y2E5 1009 aa19.26■□□□□ 0.67
SNX27-204ENST00000458013 J3QRK9 145 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 PLOD2O00469 737 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 NARSO43776 548 aaKnown RBP19.25■□□□□ 0.67
SNX27-204ENST00000458013 USP2O75604 605 aaPredicted RBP19.25■□□□□ 0.67
SNX27-204ENST00000458013 SOX14O95416 240 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 COL6A2P12110 1019 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 ATAT1Q5SQI0 421 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 RASGRP3Q8IV61 690 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 MMAAQ8IVH4 418 aaKnown RBP19.25■□□□□ 0.67
SNX27-204ENST00000458013 RIOK2Q9BVS4 552 aaKnown RBP19.25■□□□□ 0.67
SNX27-204ENST00000458013 VNN3Q9NY84 501 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 YARS2Q9Y2Z4 477 aaKnown RBP19.25■□□□□ 0.67
SNX27-204ENST00000458013 COL1A2P08123 1366 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 TNFRSF10BO14763 440 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 ADAMDEC1O15204 470 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 ZNF16P17020 682 aaPredicted RBP19.25■□□□□ 0.67
SNX27-204ENST00000458013 CCKBRP32239 447 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 SNX29P2Q8IUI4 249 aa19.25■□□□□ 0.67
SNX27-204ENST00000458013 ZNF548Q8NEK5 533 aaPredicted RBP19.25■□□□□ 0.67
SNX27-204ENST00000458013 POLR2J2Q9GZM3 115 aaKnown RBP19.25■□□□□ 0.67
SNX27-204ENST00000458013 LMTK2Q8IWU2 1503 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms