RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 PRCCQ92733 491 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 ERLEC1Q96DZ1 483 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 CDCA5Q96FF9 252 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 C16orf45Q96MC5 204 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 RUFY1Q96T51 708 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 CPNE1Q99829 537 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 OSBPL8Q9BZF1 889 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 WNT5BQ9H1J7 359 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 FN3KQ9H479 309 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 C6orf106Q9H6K1 298 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 DNAJC11Q9NVH1 559 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 VPS18Q9P253 973 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 VDAC3Q9Y277 283 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 TEX264Q9Y6I9 313 aa4.81□□□□□ -1.64
HMGB1P26-201ENST00000452520 ASTN2O75129 1339 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 HEPACAM2A8MVW5 462 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 TMEM189-UBE2V1I3L0A0 370 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 PLOD2O00469 737 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 SLC16A5O15375 505 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 TTI1O43156 1089 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 SSX4O60224 188 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 LDB3O75112 727 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 NME6O75414 186 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 MED24O75448 989 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 DDHD2O94830 711 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 GH1P01241 217 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ALPPP05187 535 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ALPPL2P10696 532 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 HLA-DOBP13765 273 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 CD22P20273 847 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ACAT1P24752 427 aaKnown RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 GNL1P36915 607 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 IL15P40933 162 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 FRKP42685 505 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 CAMLGP49069 296 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ISL1P61371 349 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 HTD2P86397 168 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 RELQ04864 619 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ZBTB17Q13105 803 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 UBE2V1Q13404 147 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 TRA2AQ13595 282 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 PDK1Q15118 436 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 IQCCQ4KMZ1 466 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ZNF585BQ52M93 769 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 TMEM35AQ53FP2 167 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 C9orf57Q5W0N0 161 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ZDHHC20Q5W0Z9 365 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 CASC4Q6P4E1 433 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 Q75L30 129 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ZNF534Q76KX8 674 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 MEPCEQ7L2J0 689 aaKnown RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 TMPRSS12Q86WS5 348 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 PM20D2Q8IYS1 436 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ANKRD13CQ8N6S4 541 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 ZNF441Q8N8Z8 693 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 NEK11Q8NG66 645 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 SLC38A5Q8WUX1 472 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 RAD54LQ92698 747 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 SLAMF9Q96A28 289 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 CENPTQ96BT3 561 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 SPATA33Q96N06 139 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 DUX5Q96PT3 197 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 TSPAN18Q96SJ8 248 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 GTPBP2Q9BX10 602 aaKnown RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 C1QTNF4Q9BXJ3 329 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 MOV10L1Q9BXT6 1211 aaKnown RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 HSD3B7Q9H2F3 369 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 DPAGT1Q9H3H5 408 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 DDX31Q9H8H2 851 aaKnown RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 MYNNQ9NPC7 610 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 RCC2Q9P258 522 aaKnown RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 RPH3AQ9Y2J0 694 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 PCDHAC2Q9Y5I4 1007 aa4.8□□□□□ -1.64
HMGB1P26-201ENST00000452520 A0A1W2PPQ1 181 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 MEIS2O14770 477 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 NDC80O14777 642 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 AP5Z1O43299 807 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 XRCC3O43542 346 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 PGLSO95336 258 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 FERP16591 822 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 ITGA2P17301 1181 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 MPZP25189 248 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 CCND3P30281 292 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 CCKBRP32239 447 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 USP8P40818 1118 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 CTSCP53634 463 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 TPD52P55327 224 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 UBASH3AP57075 661 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 CD81P60033 236 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 KLHL30Q0D2K2 578 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 GTF2H2Q13888 395 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 ZNF234Q14588 700 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 NR1D2Q14995 579 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 SGCBQ16585 318 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 AARDQ4LEZ3 155 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 ZNF789Q5FWF6 425 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 LRRC73Q5JTD7 316 aa4.79□□□□□ -1.64
HMGB1P26-201ENST00000452520 ZNF324BQ6AW86 544 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms