RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 FAM45BPQ6NSW5 357 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 ZC3HC1Q86WB0 502 aaKnown RBP19.3■□□□□ 0.68
COL9A3-202ENST00000452372 SPNS2Q8IVW8 549 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 CPNE9Q8IYJ1 553 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 GPATCH11Q8N954 259 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 FAM45AQ8TCE6 357 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 MCMBPQ9BTE3 642 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 DDA1Q9BW61 102 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 ASPSCR1Q9BZE9 553 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 SEMA4CQ9C0C4 833 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 C1GALT1Q9NS00 363 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 ACTR10Q9NZ32 417 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 SETXQ7Z333 2677 aaKnown RBP19.29■□□□□ 0.68
COL9A3-202ENST00000452372 CXorf49A8MYA2 514 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-202ENST00000452372 RASGRF2O14827 1237 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 ZBTB11O95625 1053 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-202ENST00000452372 CHRM5P08912 532 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-202ENST00000452372 CDH3P22223 829 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 FDXRP22570 491 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 BDKRB1P46663 353 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 RGS4P49798 205 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 TGIF1Q15583 401 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 CCSMST1Q4G0I0 132 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 DCAF12Q5T6F0 453 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 LRRC8EQ6NSJ5 796 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 PAQR3Q6TCH7 311 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 RELL1Q8IUW5 271 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 RASGRP3Q8IV61 690 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 ASB11Q8WXH4 323 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 PPM1MQ96MI6 270 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 PITPNM3Q9BZ71 974 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 RHOJQ9H4E5 214 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 SPHK1Q9NYA1 384 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 CIDEBQ9UHD4 219 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 SLC39A10Q9ULF5 831 aa19.29■□□□□ 0.68
COL9A3-202ENST00000452372 TENM4Q6N022 2769 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 GFYI3L273 518 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 POLR1CO15160 346 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-202ENST00000452372 PIAS1O75925 651 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 CATP04040 527 aaKnown RBP19.28■□□□□ 0.68
COL9A3-202ENST00000452372 ECHS1P30084 290 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 SH3BP2P78314 561 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 HSD11B2P80365 405 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 SRSF6Q13247 344 aaKnown RBP19.28■□□□□ 0.68
COL9A3-202ENST00000452372 PDAP1Q13442 181 aaKnown RBP19.28■□□□□ 0.68
COL9A3-202ENST00000452372 KIR2DS3Q14952 304 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 ANKS6Q68DC2 871 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 SPESP1Q6UW49 350 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 IFT20Q8IY31 132 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 D2HGDHQ8N465 521 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 RAB42Q8N4Z0 105 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 LINC01555Q8NAE3 123 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 FBXO15Q8NCQ5 510 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-202ENST00000452372 OR2L8Q8NGY9 312 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 FLVCR1-AS1Q8TAF5 88 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 FBF1Q8TES7 1133 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 EEF1AKMT1Q8WVE0 214 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 PMEPA1Q969W9 287 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 IL17FQ96PD4 163 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 TEFMQ96QE5 360 aaKnown RBP19.28■□□□□ 0.68
COL9A3-202ENST00000452372 OR2A14Q96R47 310 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 FMO2Q99518 471 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 OLFM1Q99784 485 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 ZPBPQ9BS86 351 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 RAB11FIP5Q9BXF6 653 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 FOXJ2Q9P0K8 574 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 B3GALT1Q9Y5Z6 326 aa19.28■□□□□ 0.68
COL9A3-202ENST00000452372 SLC9B1P1A6NJY1 282 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 ARHGEF33A8MVX0 844 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 UGT2B7P16662 529 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 CD82P27701 267 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 STX2P32856 288 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 ARL4DP49703 201 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 FOXM1Q08050 763 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 KIAA1614Q5VZ46 1190 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 FBXO38Q6PIJ6 1188 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 CEACAM20Q6UY09 585 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 PIWIL4Q7Z3Z4 852 aaKnown RBP19.27■□□□□ 0.68
COL9A3-202ENST00000452372 OR9A1PQ8NGU1 263 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 HMGCLL1Q8TB92 370 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 ELMO2Q96JJ3 720 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 CCNL2Q96S94 520 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-202ENST00000452372 CPNE1Q99829 537 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 APMAPQ9HDC9 416 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 SPATA7Q9P0W8 599 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 TXNDC16Q9P2K2 825 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 LNPEPQ9UIQ6 1025 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 BTRCQ9Y297 605 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 PCDHB11Q9Y5F2 797 aa19.27■□□□□ 0.68
COL9A3-202ENST00000452372 SNRNP200O75643 2136 aaKnown RBP19.27■□□□□ 0.67
COL9A3-202ENST00000452372 PCM1Q15154 2024 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 FAM95CA0A1B0GW59 222 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 ISM1B1AKI9 464 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 MYO1CO00159 1063 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 ZBTB14O43829 449 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 RHOXF2BP0C7M4 288 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 PEBP1P30086 187 aaKnown RBP19.26■□□□□ 0.67
COL9A3-202ENST00000452372 IL2P60568 153 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 LY6DQ14210 128 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 IL11RAQ14626 422 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms