RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 RDH14Q9HBH5 336 aa12.64□□□□□ -0.39
VPS33A-202ENST00000451053 NMRAL1Q9HBL8 299 aa12.64□□□□□ -0.39
VPS33A-202ENST00000451053 TMEM9Q9P0T7 183 aa12.64□□□□□ -0.39
VPS33A-202ENST00000451053 MID2Q9UJV3 735 aa12.64□□□□□ -0.39
VPS33A-202ENST00000451053 PDE10AQ9Y233 779 aa12.64□□□□□ -0.39
VPS33A-202ENST00000451053 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
VPS33A-202ENST00000451053 WDR87Q6ZQQ6 2873 aa12.64□□□□□ -0.39
VPS33A-202ENST00000451053 D6RAR5 112 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 BTN3A3O00478 584 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 SLC16A5O15375 505 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 ZW10O43264 779 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 DUX1O43812 170 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 KLHL2O95198 593 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 CREB1P16220 341 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 CYP2A7P20853 494 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 MAP4P27816 1152 aaKnown RBP12.63□□□□□ -0.39
VPS33A-202ENST00000451053 SHMT2P34897 504 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 CAPZBP47756 277 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 GFERP55789 205 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 ATP6V0D1P61421 351 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 PPP1CAP62136 330 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 SQSTM1Q13501 440 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 SPIDRQ14159 915 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 OR4D1Q15615 310 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 TSNQ15631 228 aaKnown RBP12.63□□□□□ -0.39
VPS33A-202ENST00000451053 PPP1R3AQ16821 1122 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 CCDC153Q494R4 210 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 MBOAT1Q6ZNC8 495 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 ADGRF3Q8IZF5 1079 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 PLD6Q8N2A8 252 aaKnown RBP12.63□□□□□ -0.39
VPS33A-202ENST00000451053 OR9A1PQ8NGU1 263 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 MAGEC3Q8TD91 643 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 MCOLN3Q8TDD5 553 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 NCSTNQ92542 709 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 PTERQ96BW5 349 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 ZMYND15Q9H091 742 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 EPB41L1Q9H4G0 881 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 PARVBQ9HBI1 364 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 PLLPQ9Y342 182 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 PIEZO1Q92508 2521 aa12.63□□□□□ -0.39
VPS33A-202ENST00000451053 FAM221BA6H8Z2 402 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 OR5K3A6NET4 321 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 KDM1AO60341 852 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 CPNE6O95741 557 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 CDK4P11802 303 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 HOXB3P14651 431 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-202ENST00000451053 POLR2CP19387 275 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-202ENST00000451053 TFEBP19484 476 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 MPSTP25325 297 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 RPA3P35244 121 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-202ENST00000451053 GLRBP48167 497 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 RAB28P51157 221 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 PDX1P52945 283 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 HES3Q5TGS1 186 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 HHATQ5VTY9 493 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 CDCP2Q5VXM1 449 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 KLHL35Q6PF15 583 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 ZNF574Q6ZN55 896 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-202ENST00000451053 ADAMTSL2Q86TH1 951 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 OOSP2Q86WS3 158 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 C2orf73Q8N5S3 287 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-202ENST00000451053 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 LINC01555Q8NAE3 123 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 OR2L8Q8NGY9 312 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 TCP10LQ8TDR4 215 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 ADAMTS14Q8WXS8 1223 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 GPR78Q96P69 363 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 ALG9Q9H6U8 611 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 ZNF358Q9NW07 568 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 HRASLS2Q9NWW9 162 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 SPHK1Q9NYA1 384 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 UTP6Q9NYH9 597 aaKnown RBP12.62□□□□□ -0.39
VPS33A-202ENST00000451053 SPATA7Q9P0W8 599 aa12.62□□□□□ -0.39
VPS33A-202ENST00000451053 DMXL1Q9Y485 3027 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 GSAPA4D1B5 854 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 CAPN5O15484 640 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 SLC16A8O95907 504 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 MT-CO3P00414 261 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 CHRM5P08912 532 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 ENO2P09104 434 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 RBP1P09455 135 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 ERGP11308 486 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 IMPA1P29218 277 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 PEBP1P30086 187 aaKnown RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 KCNC1P48547 511 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 FASTKQ14296 549 aaKnown RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 ACAP2Q15057 778 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 CYP2A13Q16696 494 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 TUBB8Q3ZCM7 444 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 N4BP2L1Q5TBK1 243 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 IRGCQ6NXR0 463 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 WDR74Q6RFH5 385 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 RBM44Q6ZP01 1051 aaKnown RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 B3GNT8Q7Z7M8 397 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 ISCA2Q86U28 154 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 PPFIBP2Q8ND30 876 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 WDR48Q8TAF3 677 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 RDH11Q8TC12 318 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 ZNF480Q8WV37 535 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms