RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 TCF12Q99081 682 aa12.61□□□□□ -0.39
SEC22C-209ENST00000449617 NLNQ9BYT8 704 aa12.61□□□□□ -0.39
SEC22C-209ENST00000449617 TRIM55Q9BYV6 548 aa12.61□□□□□ -0.39
SEC22C-209ENST00000449617 SPRTNQ9H040 489 aaPredicted RBP12.61□□□□□ -0.39
SEC22C-209ENST00000449617 KCNF1Q9H3M0 494 aa12.61□□□□□ -0.39
SEC22C-209ENST00000449617 XAB2Q9HCS7 855 aaKnown RBP12.61□□□□□ -0.39
SEC22C-209ENST00000449617 TSR3Q9UJK0 312 aaKnown RBP12.61□□□□□ -0.39
SEC22C-209ENST00000449617 NFS1Q9Y697 457 aa12.61□□□□□ -0.39
SEC22C-209ENST00000449617 KRT87PA6NCN2 255 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 K7EM74 188 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 RASGRF2O14827 1237 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 KPNA5O15131 536 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 PFDN6O15212 129 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 ZSCAN9O15535 394 aaPredicted RBP12.6□□□□□ -0.39
SEC22C-209ENST00000449617 ZSCAN12O43309 604 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 PHF2O75151 1096 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 WISP1O95388 367 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 C1orf105O95561 183 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 ESR1P03372 595 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 HBQ1P09105 142 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 MLNP12872 115 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 OGNP20774 298 aaKnown RBP12.6□□□□□ -0.39
SEC22C-209ENST00000449617 MAGP20916 626 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 TLE1Q04724 770 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 CHAF1BQ13112 559 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 NCF4Q15080 339 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 CCSMST1Q4G0I0 132 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 ANKRD20A4Q4UJ75 823 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 C1orf189Q5VU69 101 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 ZNF385CQ66K41 422 aaPredicted RBP12.6□□□□□ -0.39
SEC22C-209ENST00000449617 NEPROQ6NW34 567 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 CNSTQ6PJW8 725 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 CENPUQ71F23 418 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 CILP2Q8IUL8 1156 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 APLFQ8IW19 511 aaPredicted RBP12.6□□□□□ -0.39
SEC22C-209ENST00000449617 ACTRT1Q8TDG2 376 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 ZNF669Q96BR6 464 aaPredicted RBP12.6□□□□□ -0.39
SEC22C-209ENST00000449617 SERPINB12Q96P63 405 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 DPH2Q9BQC3 489 aaPredicted RBP12.6□□□□□ -0.39
SEC22C-209ENST00000449617 TRMT1Q9NXH9 659 aaKnown RBP12.6□□□□□ -0.39
SEC22C-209ENST00000449617 TLK1Q9UKI8 766 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 TCFL5Q9UL49 500 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 SLC39A10Q9ULF5 831 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 CRYL1Q9Y2S2 319 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 AP1M2Q9Y6Q5 423 aa12.6□□□□□ -0.39
SEC22C-209ENST00000449617 TNRC6AQ8NDV7 1962 aaKnown RBP12.6□□□□□ -0.39
SEC22C-209ENST00000449617 SETXQ7Z333 2677 aaKnown RBP12.6□□□□□ -0.39
SEC22C-209ENST00000449617 UBR5O95071 2799 aaPredicted RBP12.59□□□□□ -0.39
SEC22C-209ENST00000449617 GOLGA6L10A0A0M3HER8 536 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 FAM237BA0A1B0GVD1 139 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 ARGFXA6NJG6 315 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 SDR42E2A6NKP2 422 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 C9J4A7 227 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 H3BMM5 538 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 ZNF185O15231 689 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 KIF5CO60282 957 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 S1PR4O95977 384 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 F7P08709 466 aaPredicted RBP12.59□□□□□ -0.39
SEC22C-209ENST00000449617 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 CBSLP0DN79 551 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 AGXTP21549 392 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 CBSP35520 551 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 PTGIRP43119 386 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 MAGEA3P43357 314 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 FNTAP49354 379 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 ADARP55265 1226 aaKnown RBP12.59□□□□□ -0.39
SEC22C-209ENST00000449617 DHX34Q14147 1143 aaKnown RBP12.59□□□□□ -0.39
SEC22C-209ENST00000449617 GBX1Q14549 363 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 COLEC12Q5KU26 742 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 ZNF470Q6ECI4 717 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 RHBDD2Q6NTF9 364 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 TCTN3Q6NUS6 607 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 TTC23LQ6PF05 361 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 AGGF1Q8N302 714 aaeCLIP12.59□□□□□ -0.39
SEC22C-209ENST00000449617 ZNF655Q8N720 491 aaPredicted RBP12.59□□□□□ -0.39
SEC22C-209ENST00000449617 ADAMTS17Q8TE56 1095 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 RAD51AP1Q96B01 352 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 SLC22A18Q96BI1 424 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 RAB11FIP5Q9BXF6 653 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 EPN3Q9H201 632 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 CLMPQ9H6B4 373 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 IRAK4Q9NWZ3 460 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 GALPQ9UBC7 116 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 SNX12Q9UMY4 172 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 PLCL2Q9UPR0 1127 aa12.59□□□□□ -0.39
SEC22C-209ENST00000449617 ANKRD12Q6UB98 2062 aa12.58□□□□□ -0.39
SEC22C-209ENST00000449617 ZCWPW2A0A1B0GU75 182 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 CHRM3P20309 590 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 PSMB5P28074 263 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 ATP5DP30049 168 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 CASRP41180 1078 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 CSRP3P50461 194 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 KCNC4Q03721 635 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 SF1Q15637 639 aaKnown RBP12.58□□□□□ -0.4
SEC22C-209ENST00000449617 ASB18Q6ZVZ8 466 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 ZBTB2Q8N680 514 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 NAT8LQ8N9F0 302 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 PROKR1Q8TCW9 393 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 DENND1AQ8TEH3 1009 aa12.58□□□□□ -0.4
SEC22C-209ENST00000449617 GRK7Q8WTQ7 553 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms