RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 NDC80O14777 642 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 VPS26AO75436 327 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 SCRG1O75711 98 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 HAUS5O94927 633 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 NTRK1P04629 796 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 CD9P21926 228 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 CCNFP41002 786 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 CARSP49589 748 aaKnown RBP11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 CYP4F2P78329 520 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 RHDQ02161 417 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 ABHD18Q0P651 414 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 PDIA2Q13087 525 aaKnown RBP11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 CALCOCO2Q13137 446 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 KIR2DS3Q14952 304 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 SLC5A12Q1EHB4 618 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 KLHL38Q2WGJ6 581 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 STEAP4Q687X5 459 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 TRMT10BQ6PF06 316 aaKnown RBP11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 CDHR3Q6ZTQ4 885 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 CNTN4Q8IWV2 1026 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 RAB42Q8N4Z0 105 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 BBOF1Q8ND07 529 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 FBXO36Q8NEA4 188 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 OR2L8Q8NGY9 312 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 OR1L3Q8NH93 324 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 CD200R1Q8TD46 325 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 LRRC39Q96DD0 335 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 ERP44Q9BS26 406 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 AARSD1Q9BTE6 412 aaKnown RBP11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 LATS2Q9NRM7 1088 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 CROTQ9UKG9 612 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 MRFAP1Q9Y605 127 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 COMMD10Q9Y6G5 202 aa11.52□□□□□ -0.57
LSP1P3-201ENST00000449530 ERVH48-1M5A8F1 160 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 CPNE3O75131 537 aaKnown RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 MATN4O95460 622 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 MT-ND3P03897 115 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 MAGP20916 626 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 GABRB3P28472 473 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 DLSTP36957 453 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 CKAP4Q07065 602 aaKnown RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 ZIC1Q15915 447 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 TAF1BQ53T94 588 aaPredicted RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 RBM20Q5T481 1227 aaKnown RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 PRAMEF17Q5VTA0 474 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 CAPN12Q6ZSI9 719 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 PIWIL4Q7Z3Z4 852 aaKnown RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 MAATS1Q7Z4T9 603 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 BPHLQ86WA6 291 aaPredicted RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 CPNE9Q8IYJ1 553 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 ZBED8Q8IZ13 594 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 OR8K5Q8NH50 307 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 DENND1AQ8TEH3 1009 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 CT55Q8WUE5 264 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 ZNF592Q92610 1267 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 N4BP2L2Q92802 583 aaPredicted RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 TWSG1Q9GZX9 223 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 FAM60AQ9NP50 221 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 FAM114A2Q9NRY5 505 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 WHRNQ9P202 907 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 IL17BQ9UHF5 180 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 TRMT6Q9UJA5 497 aaKnown RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 KLHL20Q9Y2M5 609 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 MRPS18BQ9Y676 258 aaKnown RBP11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 SPTBP11277 2137 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 MGAQ8IWI9 3026 aa11.51□□□□□ -0.57
LSP1P3-201ENST00000449530 ZNF891A8MT65 544 aaPredicted RBP11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 E7ESA3 106 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 J3QKU1 62 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 PSIP1O75475 530 aaKnown RBP11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 URI1O94763 535 aaPredicted RBP11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 CATP04040 527 aaKnown RBP11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 CCNYL3P0C7X3 344 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 PRKAR1AP10644 381 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 CYP2A7P20853 494 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 MCM3P25205 808 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 PSMB5P28074 263 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 ITGA1P56199 1179 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 GPS2Q13227 327 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 TEDDM1Q5T9Z0 273 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 KIAA0408Q6ZU52 694 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 NEK10Q6ZWH5 1172 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 ZNF572Q7Z3I7 529 aaPredicted RBP11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 ZNF843Q8N446 348 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 GPATCH11Q8N954 259 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 LSM14AQ8ND56 463 aaKnown RBP11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 MAGEC3Q8TD91 643 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 STARD8Q92502 1023 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 TTC9Q92623 222 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 INPP5DQ92835 1189 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 SLC22A18Q96BI1 424 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 CLIP3Q96DZ5 547 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 TCTN2Q96GX1 697 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 SLC45A3Q96JT2 553 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 FCRL4Q96PJ5 515 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 EFHD1Q9BUP0 239 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 SLC12A9Q9BXP2 914 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms