RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 BARX2Q9UMQ3 279 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 SLC7A11Q9UPY5 501 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 PRXQ9BXM0 1461 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ERBB3P21860 1342 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SNAPINO95295 136 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 AHCYP23526 432 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SOX9P48436 509 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 FXYD6P3P58550 94 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ERVK-9P63128 1117 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 MARCH10Q8NA82 808 aaPredicted RBP8.78□□□□□ -1
NIPBL-202ENST00000448238 ZNF436Q9C0F3 470 aaPredicted RBP8.78□□□□□ -1
NIPBL-202ENST00000448238 ZNF223Q9UK11 482 aaPredicted RBP8.78□□□□□ -1
NIPBL-202ENST00000448238 POMT1Q9Y6A1 747 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CPSF1Q10570 1443 aaKnown RBP8.78□□□□□ -1
NIPBL-202ENST00000448238 APOC4-APOC2K7ER74 178 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 OR2B3O76000 313 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 APOC2P02655 101 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 TFEBP19484 476 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CYP3A5P20815 502 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CCR10P46092 362 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SLC26A2P50443 739 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 BNIP3Q12983 259 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 PDSS1Q5T2R2 415 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CES5AQ6NT32 575 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 FAM198BQ6UWH4 519 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 PGAM4Q8N0Y7 254 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 TC2NQ8N9U0 490 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SLC43A3Q8NBI5 491 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ZDHHC15Q96MV8 337 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
NIPBL-202ENST00000448238 CDT1Q9H211 546 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SEMA4AQ9H3S1 761 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 L2HGDHQ9H9P8 463 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CD109Q6YHK3 1445 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 OR6C65A6NJZ3 312 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 D6RAR5 112 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 TREHO43280 583 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 DNAJB6O75190 326 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 HOXA9P31269 272 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SMSP52788 366 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CSNK2A1P68400 391 aaPredicted RBP8.78□□□□□ -1
NIPBL-202ENST00000448238 PLP2Q04941 152 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 GAD2Q05329 585 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CRHR2Q13324 411 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 DPPA2Q7Z7J5 298 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 UEVLDQ8IX04 471 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 PIAS4Q8N2W9 510 aaPredicted RBP8.78□□□□□ -1
NIPBL-202ENST00000448238 TMEM145Q8NBT3 493 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CSNK2A3Q8NEV1 391 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 PROKR2Q8NFJ6 384 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 OR5B17Q8NGF7 314 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 LRTM1Q9HBL6 345 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 LAMP5Q9UJQ1 280 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 URB2Q14146 1524 aaKnown RBP8.78□□□□□ -1
NIPBL-202ENST00000448238 LMTK3Q96Q04 1460 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 K7EPK0 472 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 DIRAS1O95057 198 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 HEXBP07686 556 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SSTR1P30872 391 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 TAS2R20P59543 309 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SULT2A1Q06520 285 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SPP2Q13103 211 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 FAM71E2Q8N5Q1 922 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 TMEM41AQ96HV5 264 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SAMD11Q96NU1 681 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 TMEM9Q9P0T7 183 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ABHD2P08910 425 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 MMP10P09238 476 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ANXA8P13928 327 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 NT5EP21589 574 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 DGKGP49619 791 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 RAB27AP51159 221 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 TKTL1P51854 596 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ZNF132P52740 706 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 FIGNQ5HY92 759 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 POMZP3Q6PJE2 187 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 GSG1LQ6UXU4 331 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 UNC5BQ8IZJ1 945 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CCDC71LQ8N9Z2 235 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ARRDC4Q8NCT1 418 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 MBOAT7Q96N66 472 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 DCSTAMPQ9H295 470 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SGK2Q9HBY8 427 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SDHAF3Q9NRP4 125 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ERVV-1B6SEH8 477 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 E9PI62 339 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ZNF670-ZNF695F2Z2N8 137 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CDK1P06493 297 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 IRF2P14316 349 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 HMGN3Q15651 99 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 FAM117BQ6P1L5 589 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ARL9Q6T311 187 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 COX18Q8N8Q8 333 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ARMC5Q96C12 935 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ARL6Q9H0F7 186 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 DNTTIP1Q9H147 329 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 MEPEQ9NQ76 525 aaPredicted RBP8.78□□□□□ -1
NIPBL-202ENST00000448238 TNFRSF10DQ9UBN6 386 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 AGPSO00116 658 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 TOR1AO14656 332 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms