RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SNX6Q9UNH7 406 aa16.98■□□□□ 0.31
SMC6-206ENST00000446852 AP4S1Q9Y587 144 aa16.98■□□□□ 0.31
SMC6-206ENST00000446852 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.97■□□□□ 0.31
SMC6-206ENST00000446852 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.97■□□□□ 0.31
SMC6-206ENST00000446852 GRXCR2A6NFK2 248 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 VGLL3A8MV65 326 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 C1QTNF3-AMACRE9PGA6 284 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 ARNTLO00327 626 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 SLC16A8O95907 504 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 CATP04040 527 aaKnown RBP16.97■□□□□ 0.31
SMC6-206ENST00000446852 WASP42768 502 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 GSK3BP49841 420 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 USP39Q53GS9 565 aaKnown RBP16.97■□□□□ 0.31
SMC6-206ENST00000446852 IRGCQ6NXR0 463 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 AGTRAPQ6RW13 159 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 THOC6Q86W42 341 aaKnown RBP16.97■□□□□ 0.31
SMC6-206ENST00000446852 TMEM126BQ8IUX1 230 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 KRTCAP2Q8N6L1 136 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 PLA2G15Q8NCC3 412 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 FAM110BQ8TC76 370 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 ALG2Q9H553 416 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 DLGAP4Q9Y2H0 992 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 DTNAQ9Y4J8 743 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 NEUROG3Q9Y4Z2 214 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 FADS3Q9Y5Q0 445 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 ZNF839A8K0R7 811 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 BCKDHAP12694 445 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 IMPA1P29218 277 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 GDI1P31150 447 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 DRD3P35462 400 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 HALP42357 657 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 KLC1Q07866 573 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 TICAM1Q8IUC6 712 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 CFAP206Q8IYR0 622 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 RNF175Q8N4F7 328 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 OR2T34Q8NGX1 318 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 OR2T3Q8NH03 318 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 CLHC1Q8NHS4 586 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 CCDC138Q96M89 665 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 OR4K3Q96R72 315 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 PKP4Q99569 1192 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 ZCCHC2Q9C0B9 1178 aaKnown RBP16.97■□□□□ 0.31
SMC6-206ENST00000446852 NUMA1Q14980 2115 aa16.97■□□□□ 0.31
SMC6-206ENST00000446852 H3BM21 787 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 NPPAP01160 153 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 SLC7A1P30825 629 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 EIF2DP41214 584 aaKnown RBP16.96■□□□□ 0.31
SMC6-206ENST00000446852 GRIA2P42262 883 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 LIPEQ05469 1076 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 BNIP2Q12982 314 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 NAE1Q13564 534 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 FAM174BQ3ZCQ3 159 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 CACHD1Q5VU97 1274 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 FRG2Q64ET8 278 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 IFNEQ86WN2 208 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 CXorf40AQ8TE69 158 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 PPP2R3CQ969Q6 453 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 ZUFSPQ96AP4 578 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 MED8Q96G25 268 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 FRG2BQ96QU4 278 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 TRIM39Q9HCM9 518 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 USP22Q9UPT9 525 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 PCYT1BQ9Y5K3 369 aaPredicted RBP16.96■□□□□ 0.31
SMC6-206ENST00000446852 STON1Q9Y6Q2 735 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 E7EQ34 232 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 ARPC2O15144 300 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 JUPP14923 745 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 ZNF8P17098 575 aaPredicted RBP16.96■□□□□ 0.31
SMC6-206ENST00000446852 SOX9P48436 509 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 PLIN5Q00G26 463 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 SPATS1Q496A3 300 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 LCN8Q6JVE9 175 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 SPPL2CQ8IUH8 684 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 HID1Q8IV36 788 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 AADATQ8N5Z0 425 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 PPM1MQ96MI6 270 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 DPY30Q9C005 99 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 ACTR3BQ9P1U1 418 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 PCM1Q15154 2024 aa16.96■□□□□ 0.31
SMC6-206ENST00000446852 IFRD1O00458 451 aaPredicted RBP16.95■□□□□ 0.3
SMC6-206ENST00000446852 CAPNS1P04632 268 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 LAMP2P13473 410 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 RAB30Q15771 203 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 SPANXN4Q5MJ08 99 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 HOMEZQ8IX15 550 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 CANT1Q8WVQ1 401 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 SLC13A3Q8WWT9 602 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 ATL1Q8WXF7 558 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 LRTOMTQ8WZ04 291 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 ELSPBP1Q96BH3 223 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 CLMPQ9H6B4 373 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 LIN7AO14910 233 aaPredicted RBP16.95■□□□□ 0.3
SMC6-206ENST00000446852 C1orf105O95561 183 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 STAMBPO95630 424 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 PRPH2P23942 346 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 TAS2R38P59533 333 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 IRF8Q02556 426 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 SELPLGQ14242 412 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 XKR6Q5GH73 641 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms