RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 STYXL1Q9Y6J8 313 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 TEX13CA0A0J9YWL9 993 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 SDC2P34741 201 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 RPS15P62841 145 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 CBX3Q13185 183 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 SYT16Q17RD7 645 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 CADM2Q8N3J6 435 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ZCCHC10Q8TBK6 192 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 SMAD5Q99717 465 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 G6PC3Q9BUM1 346 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ARMCX1Q9P291 453 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 SOBPA7XYQ1 873 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 LOC110117498-PIK3R3F6TDL0 507 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 DDX3YO15523 660 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 CCNB2O95067 398 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ACP5P13686 325 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 PBX1P40424 430 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ZNF41P51814 821 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 NEDD8Q15843 81 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 UAP1L1Q3KQV9 507 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 FBXL22Q6P050 247 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 RBM12BQ8IXT5 1001 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ZNF483Q8TF39 744 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 TSEN15Q8WW01 171 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 CPT1BQ92523 772 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 PIK3R3Q92569 461 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 NXNL1Q96CM4 212 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 B3GALT6Q96L58 329 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 CCDC182A6NF36 153 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 EIF3FO00303 357 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 FAM153BP0C7A2 387 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 GLYATQ6IB77 296 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 TRAM1L1Q8N609 369 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 RPL10LQ96L21 214 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 PCDHB18PQ96TA0 734 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 DUSP26Q9BV47 211 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 RNF121Q9H920 327 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 SPHK2Q9NRA0 654 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ZIM2Q9NZV7 527 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 NME6O75414 186 aaPredicted RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 GSTM2P28161 218 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 HERC3Q15034 1050 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 CYP2U1Q7Z449 544 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 TMEM126BQ8IUX1 230 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 OR5T3Q8NGG3 340 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 SNIP1Q8TAD8 396 aaKnown RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 MAGEE1Q9HCI5 957 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 HSFX1Q9UBD0 423 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 CD207Q9UJ71 328 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 MICAL3Q7RTP6 2002 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 GPR37L1O60883 481 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 SNAPC5O75971 98 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 RCBTB2O95199 551 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 HSD3B1P14060 373 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 FOSL2P15408 326 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 HSD3B2P26439 372 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 CCR10P46092 362 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 CLCNKAP51800 687 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 NCBP2P52298 156 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 TIGD2Q4W5G0 525 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 ZNF550Q7Z398 422 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 CAND1Q86VP6 1230 aaKnown RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 CMTM8Q8IZV2 173 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 FSTL5Q8N475 847 aaPredicted RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 BPIFB6Q8NFQ5 453 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 PSMA8Q8TAA3 256 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 ELMO3Q96BJ8 720 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 ACP6Q9NPH0 428 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 ALKBH4Q9NXW9 302 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 EPHA6Q9UF33 1036 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 PEX10O60683 326 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 KRT36O76013 467 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 EPHA3P29320 983 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 RPS9P46781 194 aaKnown RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 ZSCAN4Q8NAM6 433 aaPredicted RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 TFGQ92734 400 aaPredicted RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 TRNT1Q96Q11 434 aaKnown RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 MGME1Q9BQP7 344 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 GRIP2Q9C0E4 1043 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 PTPRHQ9HD43 1115 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 ARL8BQ9NVJ2 186 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 CD84Q9UIB8 345 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 TMPRSS11EQ9UL52 423 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 SAGE2PA6NJ88 616 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 TPD52L2O43399 206 aaKnown RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 EDF1O60869 148 aaKnown RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 RHOP08100 348 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 ALOX12P18054 663 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 IGFBP5P24593 272 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 PITPNAQ00169 270 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 UPP1Q16831 310 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 FSTL4Q6MZW2 842 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 SLC35F5Q8WV83 523 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 DAZLQ92904 295 aaKnown RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 PDCD10Q9BUL8 212 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 PNO1Q9NRX1 252 aaKnown RBP8.36□□□□□ -1.07
PTPN3-204ENST00000446349 SIRPGQ9P1W8 387 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 GPR89AB7ZAQ6 455 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 PIRO00625 290 aa8.36□□□□□ -1.07
PTPN3-204ENST00000446349 YKT6O15498 198 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms