RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 ADPRHL2Q9NX46 363 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 RGS17Q9UGC6 210 aaPredicted RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 RPS6KA6Q9UK32 745 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 SLC22A14Q9Y267 594 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 EFCAB9A8MZ26 197 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 CLIC1O00299 241 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 B3GALT4O96024 378 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 GSTM2P28161 218 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 HTR1BP28222 390 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 STARD3Q14849 445 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 TYSND1Q2T9J0 566 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 CYP27C1Q4G0S4 372 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 INO80DQ53TQ3 878 aaPredicted RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 RSBN1Q5VWQ0 802 aaPredicted RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 OR2T5Q6IEZ7 315 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 ZNF605Q86T29 641 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 ALDH16A1Q8IZ83 802 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 TEX26Q8N6G2 289 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 DBF4BQ8NFT6 615 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 OR8J3Q8NGG0 315 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 OR2T29Q8NH02 315 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 NEU3Q9UQ49 428 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 TCRBV5S2A0A599 114 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 KRT87PA6NCN2 255 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 ZNF701M0R085 212 aaPredicted RBP11.59□□□□□ -0.55
MSH6-204ENST00000445503 LSM1O15116 133 aaKnown RBP11.59□□□□□ -0.55
MSH6-204ENST00000445503 AIREO43918 545 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 B4GALT3O60512 393 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 MFN2O95140 757 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 HOXD9P28356 352 aaPredicted RBP11.59□□□□□ -0.55
MSH6-204ENST00000445503 CHI3L1P36222 383 aaPredicted RBP11.59□□□□□ -0.55
MSH6-204ENST00000445503 ZXDBP98169 803 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 SLC13A2Q13183 592 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 TUBA3CQ13748 450 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 NIPAL1Q6NVV3 410 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 RNF175Q8N4F7 328 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 GLB1L3Q8NCI6 653 aaPredicted RBP11.59□□□□□ -0.55
MSH6-204ENST00000445503 PEX13Q92968 403 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 EGLN2Q96KS0 407 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 CDK5RAP1Q96SZ6 601 aaKnown RBP11.59□□□□□ -0.55
MSH6-204ENST00000445503 MGME1Q9BQP7 344 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 CD244Q9BZW8 370 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 GIN1Q9NXP7 522 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 ILVBLA1L0T0 632 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 OR2AG2A6NM03 316 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 NPPAP01160 153 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 UGT2B4P06133 528 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 SERPINA4P29622 427 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 SF1Q15637 639 aaKnown RBP11.59□□□□□ -0.55
MSH6-204ENST00000445503 MORN1Q5T089 497 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 ADGRF1Q5T601 910 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 ARL14EPQ8N8R7 260 aaPredicted RBP11.59□□□□□ -0.55
MSH6-204ENST00000445503 GTF2H4Q92759 462 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 ZNF347Q96SE7 839 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 ARHGAP39Q9C0H5 1083 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 IKZF5Q9H5V7 419 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 MGAMO43451 1857 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 SYN3O14994 580 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 COCHO43405 550 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 SUV39H1O43463 412 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 IGSF6O95976 241 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 TRBC1P01850 177 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 CYP2A7P20853 494 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 MED22Q15528 200 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 CLLU1OSQ5K130 101 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 AFMIDQ63HM1 303 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 ELMSAN1Q6PJG2 1045 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 DLEU7Q6UYE1 221 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 ADGRG2Q8IZP9 1017 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 FAM9CQ8IZT9 166 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 CLIP4Q8N3C7 705 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 PSD4Q8NDX1 1056 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 FBXO22Q8NEZ5 403 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 SYT17Q9BSW7 474 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 COPS4Q9BT78 406 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 KAT8Q9H7Z6 458 aaKnown RBP11.59□□□□□ -0.55
MSH6-204ENST00000445503 ERGIC3Q9Y282 383 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 SLC45A1Q9Y2W3 748 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 RLFQ13129 1914 aa11.59□□□□□ -0.55
MSH6-204ENST00000445503 SNPHO15079 494 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 ERN1O75460 977 aaKnown RBP11.58□□□□□ -0.56
MSH6-204ENST00000445503 CYP7B1O75881 506 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 OAZ2O95190 189 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 PRAMEF12O95522 483 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 PDYNP01213 254 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 SPIBQ01892 262 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 SPATS1Q496A3 300 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 RTP2Q5QGT7 225 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 NCCRP1Q6ZVX7 275 aaPredicted RBP11.58□□□□□ -0.56
MSH6-204ENST00000445503 PTRH1Q86Y79 214 aaKnown RBP11.58□□□□□ -0.56
MSH6-204ENST00000445503 BPIFB1Q8TDL5 484 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
MSH6-204ENST00000445503 BRINP2Q9C0B6 783 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 AMBRA1Q9C0C7 1298 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 NUAK2Q9H093 628 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 ATP13A3Q9H7F0 1226 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 MARCH7Q9H992 704 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 GPRC5BQ9NZH0 403 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 GABRQQ9UN88 632 aa11.58□□□□□ -0.56
MSH6-204ENST00000445503 ANK1P16157 1881 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms