RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.32■□□□□ 0.84
CDKN3-204ENST00000442975 GALPQ9UBC7 116 aa20.32■□□□□ 0.84
CDKN3-204ENST00000442975 SERTAD3Q9UJW9 196 aa20.32■□□□□ 0.84
CDKN3-204ENST00000442975 MRFAP1Q9Y605 127 aa20.32■□□□□ 0.84
CDKN3-204ENST00000442975 CDC14CA4D256 554 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 KLK3P07288 261 aaPredicted RBP20.31■□□□□ 0.84
CDKN3-204ENST00000442975 ATXN8OSP0DMR3 200 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 MAGP20916 626 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 ATP5DP30049 168 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 CCNFP41002 786 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 RPS18P62269 152 aaKnown RBP20.31■□□□□ 0.84
CDKN3-204ENST00000442975 NFATC3Q12968 1075 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 TTLL9Q3SXZ7 439 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 HSP90AA5PQ58FG0 334 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 SYDE1Q6ZW31 735 aaPredicted RBP20.31■□□□□ 0.84
CDKN3-204ENST00000442975 KCNMB4Q86W47 210 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 OR2L8Q8NGY9 312 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 CALML6Q8TD86 181 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 RAD51AP1Q96B01 352 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 RUNDC3BQ96NL0 473 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 CHST8Q9H2A9 424 aa20.31■□□□□ 0.84
CDKN3-204ENST00000442975 IARS2Q9NSE4 1012 aaKnown RBP20.31■□□□□ 0.84
CDKN3-204ENST00000442975 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.31■□□□□ 0.84
CDKN3-204ENST00000442975 MEN1O00255 615 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 FANCGO15287 622 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 TTI1O43156 1089 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 OR2B3O76000 313 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 RPS15P62841 145 aaKnown RBP20.3■□□□□ 0.84
CDKN3-204ENST00000442975 CUL1Q13616 776 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 PTCHD3Q3KNS1 767 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 MSS51Q4VC12 460 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 SYTL1Q8IYJ3 562 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 C17orf53Q8N3J3 647 aaPredicted RBP20.3■□□□□ 0.84
CDKN3-204ENST00000442975 SLC22A18Q96BI1 424 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 TRIM31Q9BZY9 425 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 PCMTD2Q9NV79 361 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 FBXO5Q9UKT4 447 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 PCDHGA6Q9Y5G7 932 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 FASNP49327 2511 aaKnown RBP20.3■□□□□ 0.84
CDKN3-204ENST00000442975 PIKFYVEQ9Y2I7 2098 aa20.3■□□□□ 0.84
CDKN3-204ENST00000442975 ZNF462Q96JM2 2506 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 ZNF749O43361 778 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 HCRTR1O43613 425 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 CREG1O75629 220 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 ERVK-10P10266 1014 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 PTPN4P29074 926 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 CLCN7P51798 805 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 KCNAB2Q13303 367 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 GBX1Q14549 363 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 MORF4L2Q15014 288 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 SF1Q15637 639 aaKnown RBP20.29■□□□□ 0.84
CDKN3-204ENST00000442975 KLHL38Q2WGJ6 581 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 HP1BP3Q5SSJ5 553 aaPredicted RBP20.29■□□□□ 0.84
CDKN3-204ENST00000442975 ZNF549Q6P9A3 640 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 SPNS2Q8IVW8 549 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 LMNTD2Q8IXW0 634 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 DSELQ8IZU8 1212 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 GIMAP7Q8NHV1 300 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 MAGEC3Q8TD91 643 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 KCNJ9Q92806 393 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 CFAP36Q96G28 342 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 LRFN5Q96NI6 719 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 SLC30A3Q99726 388 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 EBNA1BP2Q99848 306 aaKnown RBP20.29■□□□□ 0.84
CDKN3-204ENST00000442975 GPR87Q9BY21 358 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 FAM169AQ9Y6X4 670 aa20.29■□□□□ 0.84
CDKN3-204ENST00000442975 ARHGEF33A8MVX0 844 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 CCDC188H7C350 402 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 ZSCAN9O15535 394 aaPredicted RBP20.28■□□□□ 0.84
CDKN3-204ENST00000442975 SFTPCP11686 197 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 PSMB5P28074 263 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 RORAP35398 523 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 CRTC2Q53ET0 693 aaPredicted RBP20.28■□□□□ 0.84
CDKN3-204ENST00000442975 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.28■□□□□ 0.84
CDKN3-204ENST00000442975 SPANXN3Q5MJ09 141 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 ZNF605Q86T29 641 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 PDIK1LQ8N165 341 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 DENND1AQ8TEH3 1009 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 APOBEC4Q8WW27 367 aaKnown RBP20.28■□□□□ 0.84
CDKN3-204ENST00000442975 PWWP2AQ96N64 755 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 KRT12Q99456 494 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 NDNQ99608 321 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 SPRTNQ9H040 489 aaPredicted RBP20.28■□□□□ 0.84
CDKN3-204ENST00000442975 FAM114A2Q9NRY5 505 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 INTS7Q9NVH2 962 aaKnown RBP20.28■□□□□ 0.84
CDKN3-204ENST00000442975 GEMIN8Q9NWZ8 242 aaKnown RBP20.28■□□□□ 0.84
CDKN3-204ENST00000442975 CHMP2BQ9UQN3 213 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 POLHQ9Y253 713 aa20.28■□□□□ 0.84
CDKN3-204ENST00000442975 TTC4O95801 387 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 CATP04040 527 aaKnown RBP20.27■□□□□ 0.84
CDKN3-204ENST00000442975 CTSBP07858 339 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 FURINP09958 794 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 TSTA3Q13630 321 aaPredicted RBP20.27■□□□□ 0.84
CDKN3-204ENST00000442975 HIF1AQ16665 826 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 C1orf189Q5VU69 101 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 LCN10Q6JVE6 187 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 PRICKLE2Q7Z3G6 844 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 ZNF655Q8N720 491 aaPredicted RBP20.27■□□□□ 0.84
CDKN3-204ENST00000442975 ENDOVQ8N8Q3 282 aaKnown RBP20.27■□□□□ 0.84
CDKN3-204ENST00000442975 GABPB2Q8TAK5 448 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms