RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 A0A0J9YYE9 177 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 E9PBE3 544 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMX2-CTNND1H3BSU7 103 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 KLHL41O60662 606 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 TRBC1P01850 177 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 RPN2P04844 631 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 CKMT2P17540 419 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 PSMA3P25788 255 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 SPRP35270 261 aaPredicted RBP7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 ABCG1P45844 678 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 RGRP47804 291 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 MRPL19P49406 292 aaKnown RBP7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 RPL14P50914 215 aaKnown RBP7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 GALNT1Q10472 559 aaPredicted RBP7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 FXNQ16595 210 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 HSP90AA5PQ58FG0 334 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARMC3Q5W041 872 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC23A3Q6PIS1 610 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 MAMSTRQ6ZN01 415 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 FRA10AC1Q70Z53 315 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 KCNMB4Q86W47 210 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 ADAMTS16Q8TE57 1224 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZDHHC1Q8WTX9 485 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 MRGPRX3Q96LB0 322 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 FANCEQ9HB96 536 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARNT2Q9HBZ2 717 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 C20orf96Q9NUD7 363 aaPredicted RBP7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMEM181Q9P2C4 612 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 LRIT1Q9P2V4 623 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 NEUROG3Q9Y4Z2 214 aa7.21□□□□□ -1.25
CDC42BPA-208ENST00000442054 SMIM31A0A1B0GVY4 71 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 STX16-NPEPL1H3BU86 382 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 RFPL3O75679 317 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 SRP72O76094 671 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 CEACAM1P13688 526 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 PCSK6P29122 969 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 EPHA3P29320 983 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 TYK2P29597 1187 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 RGS4P49798 205 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 HK3P52790 923 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 PRKAA2P54646 552 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 FOXK2Q01167 660 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 WSCD2Q2TBF2 565 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 TECRLQ5HYJ1 363 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 MFSD4BQ5TF39 518 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 AGBL4Q5VU57 503 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 DHRS4L2Q6PKH6 230 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 PAOXQ6QHF9 649 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 RANBP10Q6VN20 620 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF761Q86XN6 746 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 FUNDC1Q8IVP5 155 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 SUMF1Q8NBK3 374 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZFP28Q8NHY6 868 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZC3H10Q96K80 434 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 C12orf66Q96MD2 445 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 USP36Q9P275 1121 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 DKK3Q9UBP4 350 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 VPS9D1Q9Y2B5 631 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 COLEC10Q9Y6Z7 277 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 PI4KAP42356 2102 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 WASH4PA8MWX3 477 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 TMEM233B4DJY2 109 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 QSOX1O00391 747 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 AURKAO14965 403 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 DUX1O43812 170 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 GREM1O60565 184 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 POP7O75817 140 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 CIB2O75838 187 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 FTH1P19P0C7X4 201 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 AK4P27144 223 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 CLCNKAP51800 687 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 PRKG2Q13237 762 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 KDELC1Q6UW63 502 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 FBXO39Q8N4B4 442 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 PPFIBP2Q8ND30 876 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 ADCY4Q8NFM4 1077 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 GPR156Q8NFN8 814 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 CALML6Q8TD86 181 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 HEXDCQ8WVB3 486 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 LCN9Q8WX39 176 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 ATP6V1E2Q96A05 226 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 ATXN7L3BQ96GX2 97 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 ELMO2Q96JJ3 720 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 RILPQ96NA2 401 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 MRPL40Q9NQ50 206 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 OLAHQ9NV23 265 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 ABCD2Q9UBJ2 740 aa7.21□□□□□ -1.26
CDC42BPA-208ENST00000442054 SIGLEC6O43699 453 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 MYF5P13349 255 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 DGKAP23743 735 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 KCNC1P48547 511 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 TBC1D25Q3MII6 688 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 NHSL2Q5HYW2 709 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 LRRC8EQ6NSJ5 796 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZCCHC8Q6NZY4 707 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 HACD2Q6Y1H2 254 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 OR6C4Q8NGE1 309 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 EXT2Q93063 718 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 ULK4Q96C45 1275 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 RCN3Q96D15 328 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms