RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 SPESP1Q6UW49 350 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 SBSNQ6UWP8 590 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 FBXO39Q8N4B4 442 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 AGBL5Q8NDL9 886 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 HMGCLL1Q8TB92 370 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 GATA6Q92908 595 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 DHRS4Q9BTZ2 278 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 SLC12A9Q9BXP2 914 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 UNKQ9C0B0 810 aaKnown RBP16.36■□□□□ 0.21
TARDBP-203ENST00000439080 TWSG1Q9GZX9 223 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 POLR1BQ9H9Y6 1135 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 PARVBQ9HBI1 364 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 SNX15Q9NRS6 342 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 PDE10AQ9Y233 779 aa16.36■□□□□ 0.21
TARDBP-203ENST00000439080 CHD8Q9HCK8 2581 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 IGHV5-51A0A0C4DH38 117 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 TRABD2BA6NFA1 517 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 ISM1B1AKI9 464 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 SLC16A8O95907 504 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 ALDOAP04075 364 aaKnown RBP16.35■□□□□ 0.21
TARDBP-203ENST00000439080 JMJD7P0C870 316 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 CCDC166P0CW27 439 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 ITIH1P19827 911 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 CDH3P22223 829 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 CRABP2P29373 138 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 PRDX3P30048 256 aaKnown RBP16.35■□□□□ 0.21
TARDBP-203ENST00000439080 GMPRP36959 345 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 KIR2DS3Q14952 304 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 CYP2A13Q16696 494 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 FBXO38Q6PIJ6 1188 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 MBOAT1Q6ZNC8 495 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 TRIM73Q86UV7 250 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 FAM129CQ86XR2 697 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 CARFQ8N187 725 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 FLVCR1-AS1Q8TAF5 88 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 CAVIN3Q969G5 261 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 OR2A14Q96R47 310 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 TMEM121BQ9BXQ6 578 aaPredicted RBP16.35■□□□□ 0.21
TARDBP-203ENST00000439080 PITPNM3Q9BZ71 974 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 DERL2Q9GZP9 239 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 SEMA5BQ9P283 1151 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 PISDQ9UG56 409 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 LNPEPQ9UIQ6 1025 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 RAB21Q9UL25 225 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 PCDHGA8Q9Y5G5 932 aa16.35■□□□□ 0.21
TARDBP-203ENST00000439080 PABPN1LA6NDY0 278 aaKnown RBP16.34■□□□□ 0.21
TARDBP-203ENST00000439080 EFCAB7A8K855 629 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 CDC7O00311 574 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 BRINP1O60477 761 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 KRT38O76015 456 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 SHBGP04278 402 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 ENO2P09104 434 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-203ENST00000439080 CNTFP26441 200 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 IMPA1P29218 277 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 HSD17B3P37058 310 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 LSSP48449 732 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 CSRP3P50461 194 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 PNLIPRP1P54315 467 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 FASTKQ14296 549 aaKnown RBP16.34■□□□□ 0.21
TARDBP-203ENST00000439080 CSHL1Q14406 222 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 ARHGAP19Q14CB8 494 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 RTP5Q14D33 572 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 TSNQ15631 228 aaKnown RBP16.34■□□□□ 0.21
TARDBP-203ENST00000439080 PPP1R3AQ16821 1122 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 TAF1BQ53T94 588 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-203ENST00000439080 ADAMTSL2Q86TH1 951 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 SPATA6LQ8N4H0 392 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 PPFIBP2Q8ND30 876 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 MCOLN3Q8TDD5 553 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 ZNF480Q8WV37 535 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 KLHL6Q8WZ60 621 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 ANKRD7Q92527 254 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 PRR11Q96HE9 360 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-203ENST00000439080 C1GALT1Q9NS00 363 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 OCIAD1Q9NX40 245 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 SIDT1Q9NXL6 827 aaKnown RBP16.34■□□□□ 0.21
TARDBP-203ENST00000439080 PSMC3IPQ9P2W1 217 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-203ENST00000439080 FETUBQ9UGM5 382 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 AK5Q9Y6K8 562 aa16.34■□□□□ 0.21
TARDBP-203ENST00000439080 A0A0J9YY10 115 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 ZNF839A8K0R7 811 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 ZBTB11O95625 1053 aaPredicted RBP16.33■□□□□ 0.2
TARDBP-203ENST00000439080 HIST1H2AGP0C0S8 130 aaPredicted RBP16.33■□□□□ 0.2
TARDBP-203ENST00000439080 CCL4P13236 92 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 PVRP15151 417 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 CD1DP15813 335 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 ST6GAL1P15907 406 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 NELFEP18615 380 aaKnown RBP16.33■□□□□ 0.2
TARDBP-203ENST00000439080 HIST1H2ADP20671 130 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 PSMB5P28074 263 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 HSD17B2P37059 387 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 ETV5P41161 510 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 IRF9Q00978 393 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 FRA10AC1Q70Z53 315 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 TBC1D1Q86TI0 1168 aaPredicted RBP16.33■□□□□ 0.2
TARDBP-203ENST00000439080 KMT5CQ86Y97 462 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 SYTL1Q8IYJ3 562 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 BMPERQ8N8U9 685 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 ISL2Q96A47 359 aa16.33■□□□□ 0.2
TARDBP-203ENST00000439080 SLC22A18Q96BI1 424 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms