RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TBC1D16Q8TBP0 767 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 PPP4R1Q8TF05 950 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 PRPF31Q8WWY3 499 aaKnown RBP3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 PTERQ96BW5 349 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 OXNAD1Q96HP4 312 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 RTN4RQ9BZR6 473 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 FKRPQ9H9S5 495 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 ABCF3Q9NUQ8 709 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 DNAJB4Q9UDY4 337 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 TCF19Q9Y242 345 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 FAM169AQ9Y6X4 670 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 CHD8Q9HCK8 2581 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 NRXN2Q9P2S2 1712 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 hCG_1809904A0A1W2PP81 198 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 A0A1W2PPE2 198 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 A0A1W2PR64 198 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 MED19A0JLT2 244 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 OR5K3A6NET4 321 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZNHIT1O43257 154 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 DNTTP04053 509 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 PAX1P15863 534 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 PRLRP16471 622 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 GJA1P17302 382 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 NR2F2P24468 414 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 EEF1A1P68104 462 aaKnown RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 PRPF4BQ13523 1007 aaKnown RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 GRAPQ13588 217 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 MVPQ14764 893 aaKnown RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 TMEM266Q2M3C6 531 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 EEF1A1P5Q5VTE0 462 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 GARNL3Q5VVW2 1013 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 FAM171BQ6P995 826 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 TPRG1Q6ZUI0 275 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 INTS8Q75QN2 995 aaKnown RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 HAUS6Q7Z4H7 955 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 LDB1Q86U70 411 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 NME8Q8N427 588 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 GBGT1Q8N5D6 347 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 GCSAMQ8N6F7 178 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 C1orf52Q8N6N3 182 aaKnown RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 LSMEM1Q8N8F7 131 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 AVL9Q8NBF6 648 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 SLC38A9Q8NBW4 561 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 KCTD6Q8NC69 237 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 OR52I2Q8NH67 350 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 LRRC8CQ8TDW0 803 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 SEMA4DQ92854 862 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 PHF21AQ96BD5 680 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 TMCO6Q96DC7 493 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 CCDC34Q96HJ3 373 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 DEFB118Q96PH6 123 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 TRPC7Q9HCX4 862 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 TCP11L1Q9NUJ3 509 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 PSD3Q9NYI0 1048 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 NKIRAS2Q9NYR9 191 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 LARSQ9P2J5 1176 aaKnown RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 PPIEQ9UNP9 301 aaKnown RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZNF148Q9UQR1 794 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 DLGAP4Q9Y2H0 992 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 TTLL3Q9Y4R7 772 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 AFDNP55196 1824 aaKnown RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 COL4A5P29400 1685 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 UNC79Q9P2D8 2635 aa3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 CENPJQ9HC77 1338 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P12-201ENST00000438745 TONSLQ96HA7 1378 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 LTN1O94822 1766 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 SNED1Q8TER0 1413 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 LOC102723996A0A087X1L8 192 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 A0A1W2PP11 408 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 PI4K2BG5E9Z4 385 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 FAM72CH0Y354 149 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 EIF3DO15371 548 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 DIAPH2O60879 1101 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 WDR1O75083 606 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 SLC22A3O75751 556 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 BMP10O95393 424 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 ADRB2P07550 413 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 HSP90AB1P08238 724 aaKnown RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 NR2F1P10589 423 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 FGF5P12034 268 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 GABRA5P31644 462 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 LIG4P49917 911 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 LINC01547P58512 204 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 HILS1P60008 231 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 SNRPEP62304 92 aaKnown RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 CALD1Q05682 793 aaKnown RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 GAGE5Q13069 117 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 GAGE6Q13070 117 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 PLA2G7Q13093 441 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZNF234Q14588 700 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 CCNYL2Q5T2Q4 361 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 C6orf163Q5TEZ5 329 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 FAM72AQ5TYM5 149 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 TMEM211Q6ICI0 200 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 FAM72DQ6L9T8 149 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 TEX38Q6PEX7 206 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZNF852Q6ZMS4 543 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZNF534Q76KX8 674 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms