RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SLC2A11Q9BYW1 496 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 LRTM1Q9HBL6 345 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 ADH1AP07327 375 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 SLC7A1P30825 629 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 CTSCP53634 463 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 NKX3-2P78367 333 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 IRF8Q02556 426 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 CHIT1Q13231 466 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 INO80DQ53TQ3 878 aaPredicted RBP15.2■□□□□ 0.02
SCARF1-203ENST00000434376 OR4F3Q6IEY1 312 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 STK40Q8N2I9 435 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 DTWD1Q8N5C7 304 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 ARL10Q8N8L6 244 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 TMEM125Q96AQ2 219 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 MAGEE1Q9HCI5 957 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 TDP1Q9NUW8 608 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 SH3BP4Q9P0V3 963 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 ANAPC2Q9UJX6 822 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 PDE10AQ9Y233 779 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 FADS3Q9Y5Q0 445 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 A0A0G2JN53 185 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 TTC36A6NLP5 189 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 H3BMQ9 156 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 IFRD1O00458 451 aaPredicted RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 FUCA1P04066 466 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 SERPIND1P05546 499 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 POLR2EP19388 210 aaKnown RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 NNMTP40261 264 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 LSM3P62310 102 aaKnown RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 TXNL4AP83876 142 aaKnown RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 ZBED5Q49AG3 693 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 XKR6Q5GH73 641 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 TRMT11Q7Z4G4 463 aaKnown RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 C11orf96Q7Z7L8 435 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 TCEAL8Q8IYN2 117 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 CRIPAKQ8N1N5 446 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 C10orf111Q8N326 155 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 BADQ92934 168 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 MYRFLQ96LU7 910 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 COG8Q96MW5 612 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 RMI1Q9H9A7 625 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 EIF3LQ9Y262 564 aaKnown RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 MRPS23Q9Y3D9 190 aaKnown RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 VPS13AQ96RL7 3174 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 FUOMA2VDF0 154 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 TSPAN6O43657 245 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 CBFA2T3O75081 653 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 ZNF821O75541 412 aaPredicted RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 FGF4P08620 206 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 MSH3P20585 1137 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 CDH3P22223 829 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 POLR2IP36954 125 aaKnown RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 ALDH3B2P48448 385 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 B4GALNT1Q00973 533 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 VAC14Q08AM6 782 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 TRAF3Q13114 568 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 TMEM215Q68D42 235 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 BORAQ6PGQ7 559 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 Q6ZNX1 250 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 SGCDQ92629 289 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 BORCS5Q969J3 196 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 APIPQ96GX9 242 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 CD300AQ9UGN4 299 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 ADGRE2Q9UHX3 823 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 DAPK2Q9UIK4 370 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 URB1O60287 2271 aaKnown RBP15.19■□□□□ 0.02
SCARF1-203ENST00000434376 DNAJB1P25685 340 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 PTGER1P34995 402 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 CYP4F2P78329 520 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 MERTKQ12866 999 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 TTLL9Q3SXZ7 439 aa15.19■□□□□ 0.02
SCARF1-203ENST00000434376 KDM1AO60341 852 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 FKBP9O95302 570 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 ADSLP30566 484 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-203ENST00000434376 SLC26A3P40879 764 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 CD97P48960 835 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 SUOXP51687 545 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 FKBP9P1Q75LS8 142 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 TMEM199Q8N511 208 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 OR7A2PQ8NGA2 310 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 ACDQ96AP0 544 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 RHBDF1Q96CC6 855 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 IL17FQ96PD4 163 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 CGREF1Q99674 301 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 P2RY12Q9H244 342 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 FAM83DQ9H4H8 585 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 ACTL8Q9H568 366 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 FANCEQ9HB96 536 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 DUS2Q9NX74 493 aaKnown RBP15.18■□□□□ 0.02
SCARF1-203ENST00000434376 DNMT3BQ9UBC3 853 aaKnown RBP15.18■□□□□ 0.02
SCARF1-203ENST00000434376 ST14Q9Y5Y6 855 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 THSD7BQ9C0I4 1608 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 GNG14A0A1W2PPG7 69 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 CFAP99D6REC4 459 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 K7ESM1 405 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 GREM1O60565 184 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 BCL10O95999 233 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 PORP16435 677 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-203ENST00000434376 GNPDA1P46926 289 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 CLCN2P51788 898 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms