RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SELENOFO60613 162 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 CTSVO60911 334 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 FCGR3BO75015 233 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZBTB11O95625 1053 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 ALPLP05186 524 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 INHBAP08476 426 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 SMIM18P0DKX4 95 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 TGFB3P10600 412 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 CDK4P11802 303 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 PLA2G2AP14555 144 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 NR1D1P20393 614 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 CDC25AP30304 524 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 GNL1P36915 607 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 RGS7P49802 495 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 ALDH3A2P51648 485 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 CX3CL1P78423 397 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 YWHAHQ04917 246 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 EEF1A2Q05639 463 aaKnown RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 KEAP1Q14145 624 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 CDC37Q16543 378 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 TAZQ16635 292 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF674Q2M3X9 581 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 TCTE1Q5JU00 501 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 IYDQ6PHW0 289 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 SHQ1Q6PI26 577 aaKnown RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 GBP6Q6ZN66 633 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 TUBA1AQ71U36 451 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 LONP2Q86WA8 852 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 COMMD2Q86X83 199 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 IQCA1Q86XH1 822 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 NUP93Q8N1F7 819 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 THAP8Q8NA92 274 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 NHLRC2Q8NBF2 726 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 DBF4BQ8NFT6 615 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 GRHL3Q8TE85 626 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 HEXDCQ8WVB3 486 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 IRGQQ8WZA9 623 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 SYN2Q92777 582 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 ST6GALNAC6Q969X2 333 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 RTP4Q96DX8 246 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 MYADMQ96S97 322 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 PARK7Q99497 189 aaKnown RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 TUBA1CQ9BQE3 449 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 LRRC1Q9BTT6 524 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 PELI2Q9HAT8 420 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 LRRC4Q9HBW1 653 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 TUFT1Q9NNX1 390 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 TCF7L2Q9NQB0 619 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 TBC1D7Q9P0N9 293 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 STK26Q9P289 416 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 CPSF3Q9UKF6 684 aaKnown RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 WDR83OSQ9Y284 106 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 PTPRMP28827 1452 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 DIP2BQ9P265 1576 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 WIZO95785 1651 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 YEATS2Q9ULM3 1422 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 TOP2AP11388 1531 aaKnown RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 GREB1LQ9C091 1923 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 FGD5Q6ZNL6 1462 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 TRAV24A0A0B4J272 114 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 A0A1B0GUV1 79 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 TOM1O60784 492 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 BAG2O95816 211 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 VIMP08670 466 aaKnown RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 HSPA8P11142 646 aaKnown RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 GP1BBP13224 206 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 ATP6V1B1P15313 513 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 CKMT2P17540 419 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 SCP2P22307 547 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 WNT5AP41221 380 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 PSMC4P43686 418 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 CDX1P47902 265 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 NR2C2P49116 596 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 AMPHP49418 695 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 ADARP55265 1226 aaKnown RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 FOXG1P55316 489 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 ASIC1P78348 528 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 MBTD1Q05BQ5 628 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF415Q09FC8 603 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 MORF4L2Q15014 288 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 PTGISQ16647 500 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 LACTB2Q53H82 288 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 GLRA4Q5JXX5 417 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 ELFN2Q5R3F8 820 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 ENPP7Q6UWV6 458 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 UNQ6126/PRO20091Q6UXV3 157 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 SFR1Q86XK3 245 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 SIAH3Q8IW03 269 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 CCDC170Q8IYT3 715 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 NAGSQ8N159 534 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 CARNMT1Q8N4J0 409 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 RASGEF1AQ8N9B8 481 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 OR2T12Q8NG77 320 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 CCDC107Q8WV48 283 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 HSD17B8Q92506 261 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 P2RX5Q93086 422 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 SLC47A1Q96FL8 570 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 SCRN2Q96FV2 425 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 LYZL4Q96KX0 146 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 IL17FQ96PD4 163 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms