RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 MARK1Q9P0L2 795 aa19.62■□□□□ 0.73
PMPCB-202ENST00000428154 INVSQ9Y283 1065 aa19.62■□□□□ 0.73
PMPCB-202ENST00000428154 MTCL1Q9Y4B5 1905 aaKnown RBP19.62■□□□□ 0.73
PMPCB-202ENST00000428154 EME2A4GXA9 379 aaPredicted RBP19.61■□□□□ 0.73
PMPCB-202ENST00000428154 MYCP01106 439 aaPredicted RBP19.61■□□□□ 0.73
PMPCB-202ENST00000428154 PTPN2P17706 415 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 ARSFP54793 590 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 PCDH1Q08174 1060 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 CSTF3Q12996 717 aaKnown RBP19.61■□□□□ 0.73
PMPCB-202ENST00000428154 CPSF6Q16630 551 aaKnown RBP eCLIP19.61■□□□□ 0.731e-8■■■■■ 32.5
PMPCB-202ENST00000428154 ZBED5Q49AG3 693 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 TMCO2Q7Z6W1 182 aaPredicted RBP19.61■□□□□ 0.73
PMPCB-202ENST00000428154 CALHM3Q86XJ0 350 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 ERI1Q8IV48 349 aaKnown RBP19.61■□□□□ 0.73
PMPCB-202ENST00000428154 DDHD1Q8NEL9 900 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 OR2A12Q8NGT7 310 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 SLC22A17Q8WUG5 538 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 AURKBQ96GD4 344 aaPredicted RBP19.61■□□□□ 0.73
PMPCB-202ENST00000428154 KAT8Q9H7Z6 458 aaKnown RBP19.61■□□□□ 0.73
PMPCB-202ENST00000428154 TDP1Q9NUW8 608 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 DKK3Q9UBP4 350 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 ADGRE2Q9UHX3 823 aa19.61■□□□□ 0.73
PMPCB-202ENST00000428154 MYOCOSA0A1B0GUC4 107 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 WNT9AO14904 365 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 RECQL5O94762 991 aaPredicted RBP19.6■□□□□ 0.73
PMPCB-202ENST00000428154 SLCO2B1O94956 709 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 HSD3B1P14060 373 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 JUPP14923 745 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 HSD3B2P26439 372 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 TRPC1P48995 793 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 HTRA4P83105 476 aaPredicted RBP19.6■□□□□ 0.73
PMPCB-202ENST00000428154 ABHD18Q0P651 414 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 SGO1Q5FBB7 561 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 LDLRAP1Q5SW96 308 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 CCNYL2Q5T2Q4 361 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 TTC23Q5W5X9 447 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 FRG2Q64ET8 278 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 GPR141Q7Z602 305 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 GPR149Q86SP6 731 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 ZDHHC13Q8IUH4 622 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 OR10A6Q8NH74 314 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 CLP1Q92989 425 aaKnown RBP19.6■□□□□ 0.73
PMPCB-202ENST00000428154 HIC2Q96JB3 615 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 FRG2BQ96QU4 278 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 HHIPQ96QV1 700 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 PAIP1Q9H074 479 aaKnown RBP19.6■□□□□ 0.73
PMPCB-202ENST00000428154 USE1Q9NZ43 259 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 PCDHGA11Q9Y5H2 935 aa19.6■□□□□ 0.73
PMPCB-202ENST00000428154 NEDD8-MDP1E9PL57 170 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 CXCR6O00574 342 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 KIAA0355O15063 1070 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 BNIP3LO60238 219 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 GSTM1P09488 218 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 CSF2RAP15509 400 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 GJA1P17302 382 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 POLR2EP19388 210 aaKnown RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 HOXA9P31269 272 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 GSTM4Q03013 218 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 PTCHD3Q3KNS1 767 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 PLA2G4EQ3MJ16 856 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 MBOAT1Q6ZNC8 495 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 Q6ZVU0 165 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 KIAA1958Q8N8K9 716 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 SKA2Q8WVK7 121 aaPredicted RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 FAM162AQ96A26 154 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 VPS35Q96QK1 796 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 OSBPL10Q9BXB5 764 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 PIF1Q9H611 641 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 NTN4Q9HB63 628 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 SLC25A37Q9NYZ2 338 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 ZNHIT2Q9UHR6 403 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 SLCO3A1Q9UIG8 710 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 TMPRSS11EQ9UL52 423 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 USP22Q9UPT9 525 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 ERVW-1Q9UQF0 538 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 UPK3BL1B0FP48 263 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 UPK3BL2E5RIL1 263 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 UPK1AO00322 258 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 SLC9A3R1O14745 358 aaPredicted RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 CCL16O15467 120 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 TRMUO75648 421 aaKnown RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 TYRP14679 529 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 PRPS1L1P21108 318 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 MTHFRP42898 656 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 C21orf58P58505 322 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 SRSF11Q05519 484 aaKnown RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 BIRC2Q13490 618 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 ASTLQ6HA08 431 aaPredicted RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 ADIPOR2Q86V24 386 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 ADHFE1Q8IWW8 467 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 MSRB3Q8IXL7 192 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 EID3Q8N140 333 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 FIG4Q92562 907 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 GFM2Q969S9 779 aaKnown RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 TMBIM1Q969X1 311 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 FAM120BQ96EK7 910 aaKnown RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 SLC47A1Q96FL8 570 aa19.59■□□□□ 0.73
PMPCB-202ENST00000428154 REXO5Q96IC2 774 aaKnown RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 CNDP2Q96KP4 475 aaKnown RBP19.59■□□□□ 0.73
PMPCB-202ENST00000428154 CPPED1Q9BRF8 314 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms