RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CATP04040 527 aaKnown RBP8.83□□□□□ -1
SMC1A-203ENST00000428014 CCNYL3P0C7X3 344 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 CDH3P22223 829 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 CASQ1P31415 396 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 PREPP48147 710 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 GABRA4P48169 554 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 EIF3BP55884 814 aaKnown RBP8.83□□□□□ -1
SMC1A-203ENST00000428014 ABATP80404 500 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 CALCOCO2Q13137 446 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 WHAMMP3Q1A5X7 153 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 ZC3H12BQ5HYM0 836 aaKnown RBP8.83□□□□□ -1
SMC1A-203ENST00000428014 TCTE1Q5JU00 501 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 DUPD1Q68J44 220 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 FOXR1Q6PIV2 292 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 C6orf15Q6UXA7 325 aaPredicted RBP8.83□□□□□ -1
SMC1A-203ENST00000428014 CCDC91Q7Z6B0 441 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 RELL1Q8IUW5 271 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 AGGF1Q8N302 714 aaeCLIP8.83□□□□□ -1
SMC1A-203ENST00000428014 ZBTB2Q8N680 514 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 IL22RA1Q8N6P7 574 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 OR5AR1Q8NGP9 310 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 ASB11Q8WXH4 323 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 CERS2Q96G23 380 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 AARSD1Q9BTE6 412 aaKnown RBP8.83□□□□□ -1
SMC1A-203ENST00000428014 SLC12A9Q9BXP2 914 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 ULBP3Q9BZM4 244 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 POPDC3Q9HBV1 291 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 LHX9Q9NQ69 397 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 C20orf96Q9NUD7 363 aaPredicted RBP8.83□□□□□ -1
SMC1A-203ENST00000428014 CDC23Q9UJX2 597 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 UTP11Q9Y3A2 253 aaKnown RBP8.83□□□□□ -1
SMC1A-203ENST00000428014 CFAP20Q9Y6A4 193 aaKnown RBP8.83□□□□□ -1
SMC1A-203ENST00000428014 MAD1L1Q9Y6D9 718 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 NBEAQ8NFP9 2946 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 FASNP49327 2511 aaKnown RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 FITM1A5D6W6 292 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 A8MU76 341 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 PCDH17O14917 1159 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 KIF1CO43896 1103 aaKnown RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 VPS26AO75436 327 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 CCNDBP1O95273 360 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 KLK3P07288 261 aaPredicted RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 C8GP07360 202 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 ENO2P09104 434 aaPredicted RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 TPBGLP0DKB5 382 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 FOLR1P15328 257 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 UGT2B7P16662 529 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 POLR2CP19387 275 aaPredicted RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 CHRM3P20309 590 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 CCND1P24385 295 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 OAS2P29728 719 aaKnown RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 RORAP35398 523 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 SLC1A2P43004 574 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 RGS4P49798 205 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 ARSFP54793 590 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 AP1S2P56377 157 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 DHX9Q08211 1270 aaKnown RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 NAB1Q13506 487 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 GLE1Q53GS7 698 aaKnown RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 ZNF789Q5FWF6 425 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 CDKL4Q5MAI5 379 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 RHBDD2Q6NTF9 364 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 BRICD5Q6PL45 260 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 FAM92BQ6ZTR7 304 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 ZFAND4Q86XD8 727 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 VRK3Q8IV63 474 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 GPR135Q8IZ08 494 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 GPATCH11Q8N954 259 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 C19orf47Q8N9M1 422 aaKnown RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 OR9A1PQ8NGU1 263 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 THAP4Q8WY91 577 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 SMPDL3AQ92484 453 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 TRIM44Q96DX7 344 aaPredicted RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 THAP11Q96EK4 314 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 IP6K3Q96PC2 410 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 MCMBPQ9BTE3 642 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 HGH1Q9BTY7 390 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 PCBD2Q9H0N5 130 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 ZC3H7BQ9UGR2 993 aaKnown RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 NOVA2Q9UNW9 492 aaKnown RBP8.82□□□□□ -1
SMC1A-203ENST00000428014 PLCL2Q9UPR0 1127 aa8.82□□□□□ -1
SMC1A-203ENST00000428014 GSAPA4D1B5 854 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 E7EQ34 232 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 TXNDC9O14530 226 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 TTI1O43156 1089 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 ZBTB14O43829 449 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 KLHL41O60662 606 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 IGHEP01854 428 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 ALBP02768 609 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 CYC1P08574 325 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 ST6GAL1P15907 406 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 MPSTP25325 297 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 PPM1FP49593 454 aaPredicted RBP8.81□□□□□ -1
SMC1A-203ENST00000428014 SEPHS1P49903 392 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 ITGA8P53708 1063 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 ITGA1P56199 1179 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 CXADRP78310 365 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 SH3BP2P78314 561 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 FOXM1Q08050 763 aa8.81□□□□□ -1
SMC1A-203ENST00000428014 MGAT5Q09328 741 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms