RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 KIAA0930Q6ICG6 404 aaPredicted RBP17.73■□□□□ 0.43
PSPC1-202ENST00000427943 MRNIPQ6NTE8 343 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 CNSTQ6PJW8 725 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 OTOAQ7RTW8 1153 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 CAND1Q86VP6 1230 aaKnown RBP17.73■□□□□ 0.43
PSPC1-202ENST00000427943 LRRC6Q86X45 466 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 SLC35F6Q8N357 371 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 ADAMTS17Q8TE56 1095 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 THAP4Q8WY91 577 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 LPGAT1Q92604 370 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 PBKQ96KB5 322 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 ASH1LQ9NR48 2969 aaKnown RBP17.73■□□□□ 0.43
PSPC1-202ENST00000427943 ANAPC2Q9UJX6 822 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 SLC39A10Q9ULF5 831 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 ANKRD12Q6UB98 2062 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 RASGRF2O14827 1237 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 ZSCAN9O15535 394 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 PDGFAP04085 211 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 F7P08709 466 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 HBQ1P09105 142 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 COILP38432 576 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 CASRP41180 1078 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 SARNPP82979 210 aaKnown RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 SLC9A5Q14940 896 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 NCF4Q15080 339 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 TCTN3Q6NUS6 607 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 CCDC137Q6PK04 289 aaKnown RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 ASB18Q6ZVZ8 466 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 SDCCAG8Q86SQ7 713 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 DNAJC22Q8N4W6 341 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 ZNF655Q8N720 491 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 OR2L8Q8NGY9 312 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 ZNF669Q96BR6 464 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 BIRC8Q96P09 236 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 SAMD15Q9P1V8 674 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 DHCR7Q9UBM7 475 aaKnown RBP17.72■□□□□ 0.43
PSPC1-202ENST00000427943 CRYL1Q9Y2S2 319 aa17.72■□□□□ 0.43
PSPC1-202ENST00000427943 C9J4A7 227 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 PGRMC1O00264 195 aaKnown RBP17.71■□□□□ 0.43
PSPC1-202ENST00000427943 KPNA5O15131 536 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 C1orf105O95561 183 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 OGNP20774 298 aaKnown RBP17.71■□□□□ 0.43
PSPC1-202ENST00000427943 AGXTP21549 392 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 PSMB5P28074 263 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 CYP1B1Q16678 543 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 RNF187Q5TA31 235 aaPredicted RBP17.71■□□□□ 0.43
PSPC1-202ENST00000427943 RHBDD2Q6NTF9 364 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 TTC23LQ6PF05 361 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 REXO1L1PQ8IX06 675 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 COG1Q8WTW3 980 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 CHRNA10Q9GZZ6 450 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 GRPEL1Q9HAV7 217 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 ACSS2Q9NR19 701 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 PLCL2Q9UPR0 1127 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 AP1M2Q9Y6Q5 423 aa17.71■□□□□ 0.43
PSPC1-202ENST00000427943 S1PR4O95977 384 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 PAMP19021 973 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 CCL11P51671 97 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 KLRB1Q12918 225 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 DHX34Q14147 1143 aaKnown RBP17.7■□□□□ 0.42
PSPC1-202ENST00000427943 MLIPQ5VWP3 458 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 CENPUQ71F23 418 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 RAD51AP1Q96B01 352 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 SLC22A18Q96BI1 424 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 SERPINB12Q96P63 405 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 GBP5Q96PP8 586 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 OSBPL9Q96SU4 736 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 DPH2Q9BQC3 489 aaPredicted RBP17.7■□□□□ 0.42
PSPC1-202ENST00000427943 RAB11FIP5Q9BXF6 653 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 ING2Q9H160 280 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 TXLNGQ9NUQ3 528 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 EURLQ9NYK6 297 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 GALPQ9UBC7 116 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 NEU2Q9Y3R4 380 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 MDC1Q14676 2089 aaKnown RBP17.7■□□□□ 0.42
PSPC1-202ENST00000427943 HEATR5BQ9P2D3 2071 aa17.7■□□□□ 0.42
PSPC1-202ENST00000427943 PFDN6O15212 129 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 PHF2O75151 1096 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 ESR1P03372 595 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 OTX2P32243 289 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 GRIA3P42263 894 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 FOXL2P58012 376 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 ATP1A4Q13733 1029 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 SF1Q15637 639 aaKnown RBP17.69■□□□□ 0.42
PSPC1-202ENST00000427943 ANKRD20A4Q4UJ75 823 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 FCRL6Q6DN72 434 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 ZNF470Q6ECI4 717 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 NEPROQ6NW34 567 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 CILP2Q8IUL8 1156 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 SPNS2Q8IVW8 549 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 TEX19Q8NA77 164 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 DENND1AQ8TEH3 1009 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 FOPNLQ96NB1 174 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 TCF12Q99081 682 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 NAP1L3Q99457 506 aaPredicted RBP17.69■□□□□ 0.42
PSPC1-202ENST00000427943 NDC1Q9BTX1 674 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 SLC25A23Q9BV35 468 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 GPN3Q9UHW5 284 aaPredicted RBP17.69■□□□□ 0.42
PSPC1-202ENST00000427943 SRPK3Q9UPE1 567 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms