RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 TMTC1Q8IUR5 882 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 RHOT2Q8IXI1 618 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 KBTBD2Q8IY47 623 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 METTL27Q8N6F8 245 aaPredicted RBP14.05□□□□□ -0.16
PDAP1-202ENST00000426447 TTC29Q8NA56 475 aaPredicted RBP14.05□□□□□ -0.16
PDAP1-202ENST00000426447 OR5K2Q8NHB8 316 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 ELMO1Q92556 727 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 TAAR6Q96RI8 345 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 FERMT1Q9BQL6 677 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 CRB3Q9BUF7 120 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.05□□□□□ -0.16
PDAP1-202ENST00000426447 GBA3Q9H227 469 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 SMARCAL1Q9NZC9 954 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 IL1RAPL1Q9NZN1 696 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 PTGFRNQ9P2B2 879 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 CTSFQ9UBX1 484 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 SEC14L3Q9UDX4 400 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 MAU2Q9Y6X3 613 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 CCDC88CQ9P219 2028 aa14.05□□□□□ -0.16
PDAP1-202ENST00000426447 IGLV3-16A0A075B6K0 115 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 MAP2K7O14733 419 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 USP1O94782 785 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 AP2A2O94973 939 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 AP2A1O95782 977 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 ONECUT2O95948 504 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 MBD3O95983 291 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 HPP00738 406 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 CRYABP02511 175 aaKnown RBP14.04□□□□□ -0.16
PDAP1-202ENST00000426447 GYPCP04921 128 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 TPBGLP0DKB5 382 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 ACPPP15309 386 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 ACADLP28330 430 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 RBL1P28749 1068 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 CARSP49589 748 aaKnown RBP14.04□□□□□ -0.16
PDAP1-202ENST00000426447 ZNF140P52738 457 aaPredicted RBP14.04□□□□□ -0.16
PDAP1-202ENST00000426447 OCA2Q04671 838 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 RBPJQ06330 500 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 INAQ16352 499 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.04□□□□□ -0.162e-7■□□□□ 10.7
PDAP1-202ENST00000426447 FAM214AQ32MH5 1076 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 SYTL3Q4VX76 610 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 TFDP3Q5H9I0 405 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 TCTE1Q5JU00 501 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 YOD1Q5VVQ6 348 aaPredicted RBP14.04□□□□□ -0.16
PDAP1-202ENST00000426447 XKRXQ6PP77 449 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 COX15Q7KZN9 410 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 CCDC50Q8IVM0 306 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 PRSS58Q8IYP2 241 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 LRRC45Q96CN5 670 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 QKIQ96PU8 341 aaKnown RBP eCLIP14.04□□□□□ -0.16
PDAP1-202ENST00000426447 TRIM56Q9BRZ2 755 aaKnown RBP14.04□□□□□ -0.16
PDAP1-202ENST00000426447 C10orf88Q9H8K7 445 aa14.04□□□□□ -0.16
PDAP1-202ENST00000426447 INTS7Q9NVH2 962 aaKnown RBP14.04□□□□□ -0.16
PDAP1-202ENST00000426447 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■■■□□ 17.9
PDAP1-202ENST00000426447 NSG1A0A0A6YYJ2 146 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 QSOX1O00391 747 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 RASAL1O95294 804 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 FTH1P02794 183 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 PRSS56P0CW18 603 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 MYBL2P10244 700 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 ESRRAP11474 423 aaPredicted RBP14.03□□□□□ -0.16
PDAP1-202ENST00000426447 COMTP21964 271 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 MCM3P25205 808 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 PEBP1P30086 187 aaKnown RBP14.03□□□□□ -0.16
PDAP1-202ENST00000426447 SSTR2P30874 369 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 ADRA1AP35348 466 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 NSG1P42857 185 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 CA7P43166 264 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 GCGRP47871 477 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 TNFSF10P50591 281 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 CCDC181Q5TID7 509 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 NAPRTQ6XQN6 538 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 C2orf73Q8N5S3 287 aaPredicted RBP14.03□□□□□ -0.16
PDAP1-202ENST00000426447 SUN3Q8TAQ9 357 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 HAS2Q92819 552 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 SLC22A18Q96BI1 424 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 MIEF2Q96C03 454 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 DNAJC1Q96KC8 554 aaKnown RBP14.03□□□□□ -0.16
PDAP1-202ENST00000426447 C19orf43Q9BQ61 176 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 TRIM8Q9BZR9 551 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 ZNF304Q9HCX3 659 aa14.03□□□□□ -0.16
PDAP1-202ENST00000426447 MRPS2Q9Y399 296 aaKnown RBP14.03□□□□□ -0.16
PDAP1-202ENST00000426447 PDZD2O15018 2839 aa14.02□□□□□ -0.16
PDAP1-202ENST00000426447 F8P00451 2351 aa14.02□□□□□ -0.16
PDAP1-202ENST00000426447 TRBV5-4A0A0C4DH59 114 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 VSTM2BA6NLU5 285 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 WFS1O76024 890 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 ZRANB2O95218 330 aaKnown RBP eCLIP14.02□□□□□ -0.17
PDAP1-202ENST00000426447 F10P00742 488 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 CXCR2P25025 360 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 PSMB4P28070 264 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 RAB28P51157 221 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 SMSP52788 366 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 PLOD1Q02809 727 aaPredicted RBP14.02□□□□□ -0.17
PDAP1-202ENST00000426447 SRSF11Q05519 484 aaKnown RBP14.02□□□□□ -0.17
PDAP1-202ENST00000426447 CACNG1Q06432 222 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 KLC1Q07866 573 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 MSLNQ13421 630 aaPredicted RBP14.02□□□□□ -0.17
PDAP1-202ENST00000426447 SPARCL1Q14515 664 aa14.02□□□□□ -0.17
PDAP1-202ENST00000426447 IQCB1Q15051 598 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms