RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 DUX1O43812 170 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 CCNT2O60583 730 aaKnown RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 SNUPNO95149 360 aaKnown RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 PNLIPP16233 465 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 ALDH4A1P30038 563 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 ALDH3A1P30838 453 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 UBE2IP63279 158 aaKnown RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 GPLD1P80108 840 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 DUS1LQ6P1R4 473 aaKnown RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 AGTRAPQ6RW13 159 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 AFAP1L2Q8N4X5 818 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 CCNYL1Q8N7R7 359 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 PTGR2Q8N8N7 351 aaPredicted RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 PDPRQ8NCN5 879 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 GPR156Q8NFN8 814 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 OR4E2Q8NGC2 313 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 OR52E1Q8NGJ3 308 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 APOLD1Q96LR9 279 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 MAGEB10Q96LZ2 347 aaPredicted RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 GPR78Q96P69 363 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 PKP4Q99569 1192 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 DRC3Q9H069 523 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 ABCG4Q9H172 646 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 ABCF3Q9NUQ8 709 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 ST14Q9Y5Y6 855 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 KCNE2Q9Y6J6 123 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 PIPSLA2A3N6 862 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 GSAPA4D1B5 854 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 WDR91A4D1P6 747 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 LILRA5A6NI73 299 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 C2orf74A8MZ97 194 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 ISM1B1AKI9 464 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 H3BQF6 201 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 NOBOXO60393 691 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 CRCPO75575 148 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 SUPT7LO94864 414 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 UBXN7O94888 489 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 WDR47O94967 919 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 SLC16A8O95907 504 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 TOP3BO95985 862 aaKnown RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 CREB1P16220 341 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 EPB42P16452 691 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 GRK2P25098 689 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 OAS2P29728 719 aaKnown RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 SERPINB5P36952 375 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 SERPINB4P48594 390 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 MAZP56270 477 aaKnown RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 HERVK_113P63132 956 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 NFKB2Q00653 900 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 NAE1Q13564 534 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 GPR18Q14330 331 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 SETDB1Q15047 1291 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 SHBQ15464 509 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 PHKG1Q16816 387 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 PPP1R3AQ16821 1122 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 LRRC70Q7Z2Q7 622 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 SNX31Q8N9S9 440 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 KYQ8NBH2 561 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 OR2I1PQ8NGU4 316 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 OR2L8Q8NGY9 312 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 WDR48Q8TAF3 677 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 RAB3IL1Q8TBN0 382 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 LRRC8CQ8TDW0 803 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 RHBDF1Q96CC6 855 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 ZDHHC12Q96GR4 267 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 CNDP2Q96KP4 475 aaKnown RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 DPYSL5Q9BPU6 564 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 ERVK-6Q9BXR3 956 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 OXSMQ9NWU1 459 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 STOX2Q9P2F5 926 aaPredicted RBP9.8□□□□□ -0.84
CD44-207ENST00000425428 SLC17A7Q9P2U7 560 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 PCDHB11Q9Y5F2 797 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 C4orf47A7E2U8 309 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 A8MT66 165 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 FKBP9O95302 570 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 MLYCDO95822 493 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 EML2O95834 649 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 BPGMP07738 259 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 CHN1P15882 459 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 CKMT2P17540 419 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 IMPDH1P20839 514 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 HRH2P25021 359 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 EEF1DP29692 281 aaKnown RBP9.79□□□□□ -0.84
CD44-207ENST00000425428 CMPK1P30085 196 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 GRK3P35626 688 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 ATP1A2P50993 1020 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 DNAJB13P59910 316 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 NHLH1Q02575 133 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 KIR2DS3Q14952 304 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 SF1Q15637 639 aaKnown RBP9.79□□□□□ -0.84
CD44-207ENST00000425428 RBBP7Q16576 425 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 CYP2A13Q16696 494 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 HIST2H2ACQ16777 129 aaPredicted RBP9.79□□□□□ -0.84
CD44-207ENST00000425428 HIST2H2AA3Q6FI13 130 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 CDHR3Q6ZTQ4 885 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 PLXDC1Q8IUK5 500 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 NAXDQ8IW45 347 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 SLC35F3Q8IY50 421 aa9.79□□□□□ -0.84
CD44-207ENST00000425428 PATE1Q8WXA2 126 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms