RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 NOTCH2Q04721 2471 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 A1L4Q6 167 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 BHMG1C9JSJ3 638 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-205ENST00000423214 OR1I1O60431 355 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 DDAH2O95865 285 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 PSMA3P25788 255 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 FDFT1P37268 417 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 HSPA14Q0VDF9 509 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 NR6A1Q15406 480 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 FASTKD1Q53R41 847 aaKnown RBP15.54■□□□□ 0.08
COL18A1-205ENST00000423214 AARS2Q5JTZ9 985 aaKnown RBP15.54■□□□□ 0.08
COL18A1-205ENST00000423214 TSTD2Q5T7W7 516 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 SEL1L2Q5TEA6 688 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 TAX1BP1Q86VP1 789 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 DCUN1D3Q8IWE4 304 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 SLC22A15Q8IZD6 547 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 ZADH2Q8N4Q0 377 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 OR13J1Q8NGT2 312 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 OR6P1Q8NGX9 317 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 CFAP61Q8NHU2 1237 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 DENND1AQ8TEH3 1009 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 ATG4AQ8WYN0 398 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 SLC22A18Q96BI1 424 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 PTERQ96BW5 349 aa15.54■□□□□ 0.08
COL18A1-205ENST00000423214 INTS7Q9NVH2 962 aaKnown RBP15.54■□□□□ 0.08
COL18A1-205ENST00000423214 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-205ENST00000423214 A0A1B0GX78 115 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 TCRBV7S2A1N4TA0A589 114 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 GOLGA6L6A8MZA4 724 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 KRT86O43790 486 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 IFNB1P01574 187 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 APOA4P06727 396 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 CTSBP07858 339 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 ALAS2P22557 587 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 ITGA3P26006 1051 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 ARSFP54793 590 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 ELOAQ14241 798 aaKnown RBP15.53■□□□□ 0.08
COL18A1-205ENST00000423214 MRPL14Q6P1L8 145 aaKnown RBP15.53■□□□□ 0.08
COL18A1-205ENST00000423214 TTLL10Q6ZVT0 673 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 PPP1R32Q7Z5V6 425 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 DNAJC22Q8N4W6 341 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 OR4L1Q8NH43 312 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 GSDMBQ8TAX9 411 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 ASZ1Q8WWH4 475 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 FKBP10Q96AY3 582 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 SNRNP40Q96DI7 357 aaKnown RBP15.53■□□□□ 0.08
COL18A1-205ENST00000423214 ATP13A2Q9NQ11 1180 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 EURLQ9NYK6 297 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 SLC2A6Q9UGQ3 507 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 ANAPC5Q9UJX4 755 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 CAPN6Q9Y6Q1 641 aa15.53■□□□□ 0.08
COL18A1-205ENST00000423214 AGPSO00116 658 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 S1PR4O95977 384 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 RNF224P0DH78 156 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 TPBGLP0DKB5 382 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 PIM1P11309 404 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-205ENST00000423214 CCR7P32248 378 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 FOXL2P58012 376 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 AIMP2Q13155 320 aaKnown RBP15.52■□□□□ 0.08
COL18A1-205ENST00000423214 PLEKHN1Q494U1 663 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-205ENST00000423214 IRAK1BP1Q5VVH5 260 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 UNC5DQ6UXZ4 953 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 NLRP9Q7RTR0 991 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 LURAP1LQ8IV03 231 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 FAM20CQ8IXL6 584 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 CISD2Q8N5K1 135 aaKnown RBP15.52■□□□□ 0.08
COL18A1-205ENST00000423214 C2orf73Q8N5S3 287 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-205ENST00000423214 PPHLN1Q8NEY8 458 aaKnown RBP15.52■□□□□ 0.08
COL18A1-205ENST00000423214 C19orf60Q96EN9 201 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 RANBP9Q96S59 729 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 RAB11FIP5Q9BXF6 653 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 ZNF552Q9H707 407 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-205ENST00000423214 ETNK1Q9HBU6 452 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 ASF1BQ9NVP2 202 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 CIDEBQ9UHD4 219 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 CDC23Q9UJX2 597 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 SLC39A10Q9ULF5 831 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 RIMKLBQ9ULI2 386 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 GUCA1BQ9UMX6 200 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 KLHL20Q9Y2M5 609 aa15.52■□□□□ 0.08
COL18A1-205ENST00000423214 CNOT3O75175 753 aaKnown RBP15.51■□□□□ 0.07
COL18A1-205ENST00000423214 SUN1O94901 812 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 UMODP07911 640 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 CD9P21926 228 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 ADRA1DP25100 572 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 STIP1P31948 543 aaKnown RBP15.51■□□□□ 0.07
COL18A1-205ENST00000423214 ZC3H12BQ5HYM0 836 aaKnown RBP15.51■□□□□ 0.07
COL18A1-205ENST00000423214 TTC23LQ6PF05 361 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 IGFL3Q6UXB1 125 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 VRK3Q8IV63 474 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 RAB42Q8N4Z0 105 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 TTC29Q8NA56 475 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-205ENST00000423214 LINC01555Q8NAE3 123 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 LKAAEAR1Q8TD35 194 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 SKA2Q8WVK7 121 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-205ENST00000423214 IL17FQ96PD4 163 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 FRMD8P1Q9BZ68 369 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-205ENST00000423214 RAB6BQ9NRW1 208 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 CATSPERZQ9NTU4 200 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 FBXL4Q9UKA2 621 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms