RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 RINLQ6ZS11 566 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 ERN2Q76MJ5 926 aaKnown RBP4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 TMEM110Q86TL2 294 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 TRABD2AQ86V40 505 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 PARGQ86W56 976 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 HEATR4Q86WZ0 1026 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 CHSY1Q86X52 802 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 CIR1Q86X95 450 aaPredicted RBP4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 SLC35F3Q8IY50 421 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 ZNF683Q8IZ20 524 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 ATP6V0D2Q8N8Y2 350 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 DENND6BQ8NEG7 585 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 LMO3Q8TAP4 145 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 TMEM171Q8WVE6 324 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 WDR60Q8WVS4 1066 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 KLK6Q92876 244 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 NAT6Q93015 286 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 SLC35C1Q96A29 364 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 VOPP1Q96AW1 172 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 COG8Q96MW5 612 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 PSMB7Q99436 277 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 FUCA2Q9BTY2 467 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 TRIM62Q9BVG3 475 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 CALN1Q9BXU9 219 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 SLC17A9Q9BYT1 436 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 AMBRA1Q9C0C7 1298 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 B3GNT4Q9C0J1 378 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 MMRN2Q9H8L6 949 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 UNKLQ9H9P5 680 aaKnown RBP4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 FZD3Q9NPG1 666 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 TRIM36Q9NQ86 728 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 NDUFAF4Q9P032 175 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 SLC25A13Q9UJS0 675 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 SERTAD3Q9UJW9 196 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 NFU1Q9UMS0 254 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 FADS3Q9Y5Q0 445 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 FBN2P35556 2912 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 RP1P56715 2156 aa4.64□□□□□ -1.67
CDC42EP3-202ENST00000422687 OTOGQ6ZRI0 2925 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 DOCK9Q9BZ29 2069 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 RP1L1Q8IWN7 2480 aaPredicted RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 NYNRINQ9P2P1 1898 aaKnown RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CXorf51AA0A1B0GTR3 108 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 GAGE12BA1L429 117 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CPED1A4D0V7 1026 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 GAGE12HA6NDE8 117 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 EFCAB8A8MWE9 144 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 TMX2-CTNND1H3BSU7 103 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 K7ERQ8 282 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 M0QYV0 167 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CETN3O15182 167 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 SLC16A3O15427 465 aaKnown RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 SMAD6O43541 496 aaKnown RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 TRIAP1O43715 76 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 ERN1O75460 977 aaKnown RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CLDN11O75508 207 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 ZMPSTE24O75844 475 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 PAK4O96013 591 aaPredicted RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 LIPCP11150 499 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 SLC2A3P11169 496 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 EPB41P11171 864 aaKnown RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 PFKFB1P16118 471 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 WT1P19544 449 aaPredicted RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 PRKAR1BP31321 381 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 AKT1P31749 480 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 UGT1A5P35504 534 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 ACADSBP45954 432 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CDH4P55283 916 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 TIRAPP58753 221 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 YWHAZP63104 245 aaKnown RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 RPS21P63220 83 aaKnown RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 PLP2Q04941 152 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 ZFP36L1Q07352 338 aaKnown RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 SRSF6Q13247 344 aaKnown RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 MTA1Q13330 715 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CSHL1Q14406 222 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 DRAP1Q14919 205 aaPredicted RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 TGIF1Q15583 401 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 DEFB133Q30KQ1 61 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 ZSCAN23Q3MJ62 389 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CD300EQ496F6 205 aaPredicted RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 GALNTL6Q49A17 601 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 FAAH2Q6GMR7 532 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 OR6B2Q6IFH4 312 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 KIAA1161Q6NSJ0 714 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 MZT2BQ6NZ67 158 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 TMEM270Q6UE05 265 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 RRAGAQ7L523 313 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 PTAR1Q7Z6K3 402 aaPredicted RBP4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 DCAF4L2Q8NA75 395 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 HTR3CQ8WXA8 447 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 ATG4AQ8WYN0 398 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CPT1BQ92523 772 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 EXTL1Q92935 676 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 FAM149B1Q96BN6 582 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 FAM136AQ96C01 138 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 FEM1CQ96JP0 617 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CCDC3Q9BQI4 270 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 CLPBQ9H078 707 aa4.63□□□□□ -1.67
CDC42EP3-202ENST00000422687 MIS12Q9H081 205 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms