RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 KLHL42Q9P2K6 505 aa19.61■□□□□ 0.73
GTF3A-202ENST00000419181 SLC39A10Q9ULF5 831 aa19.61■□□□□ 0.73
GTF3A-202ENST00000419181 PCDHB3Q9Y5E6 796 aa19.61■□□□□ 0.73
GTF3A-202ENST00000419181 COMMD10Q9Y6G5 202 aa19.61■□□□□ 0.73
GTF3A-202ENST00000419181 EFCAB8A8MWE9 144 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 HAUS5O94927 633 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 DLSTP36957 453 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 ELK3P41970 407 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 HIF1AQ16665 826 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 KLHL38Q2WGJ6 581 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 LINC00303Q3SY05 128 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 SYT10Q6XYQ8 523 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 CNTN4Q8IWV2 1026 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 SLC38A9Q8NBW4 561 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 EXTL1Q92935 676 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 SLC22A18Q96BI1 424 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 LRRC39Q96DD0 335 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 TSR3Q9UJK0 312 aaKnown RBP19.6■□□□□ 0.73
GTF3A-202ENST00000419181 TEX264Q9Y6I9 313 aa19.6■□□□□ 0.73
GTF3A-202ENST00000419181 KRT87PA6NCN2 255 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 NKX2-8O15522 239 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 RPL21P46778 160 aaKnown RBP19.59■□□□□ 0.73
GTF3A-202ENST00000419181 GABRA4P48169 554 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 ARL4CP56559 192 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 GPS2Q13227 327 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 TTLL9Q3SXZ7 439 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 CRTC2Q53ET0 693 aaPredicted RBP19.59■□□□□ 0.73
GTF3A-202ENST00000419181 HP1BP3Q5SSJ5 553 aaPredicted RBP19.59■□□□□ 0.73
GTF3A-202ENST00000419181 PRAMEF17Q5VTA0 474 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 ZNF517Q6ZMY9 492 aaPredicted RBP19.59■□□□□ 0.73
GTF3A-202ENST00000419181 NEK10Q6ZWH5 1172 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 TAX1BP1Q86VP1 789 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 C2orf73Q8N5S3 287 aaPredicted RBP19.59■□□□□ 0.73
GTF3A-202ENST00000419181 GABPB2Q8TAK5 448 aaPredicted RBP19.59■□□□□ 0.73
GTF3A-202ENST00000419181 HMGCLL1Q8TB92 370 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 MAGEC3Q8TD91 643 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 DENND1AQ8TEH3 1009 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 CT55Q8WUE5 264 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 CERS2Q96G23 380 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 LRFN5Q96NI6 719 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 AKIRIN1Q9H9L7 192 aaPredicted RBP19.59■□□□□ 0.73
GTF3A-202ENST00000419181 ZC3H7BQ9UGR2 993 aaKnown RBP19.59■□□□□ 0.73
GTF3A-202ENST00000419181 CHMP2BQ9UQN3 213 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 PCDHGA6Q9Y5G7 932 aa19.59■□□□□ 0.73
GTF3A-202ENST00000419181 MRPS18BQ9Y676 258 aaKnown RBP19.59■□□□□ 0.73
GTF3A-202ENST00000419181 COL6A6A6NMZ7 2263 aa19.58■□□□□ 0.73
GTF3A-202ENST00000419181 ARHGEF33A8MVX0 844 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 HCRTR1O43613 425 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 PRICKLE3O43900 615 aaPredicted RBP19.58■□□□□ 0.72
GTF3A-202ENST00000419181 PSIP1O75475 530 aaKnown RBP19.58■□□□□ 0.72
GTF3A-202ENST00000419181 C1QL1O75973 258 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 ITGA1P56199 1179 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 MRPS25P82663 173 aaKnown RBP19.58■□□□□ 0.72
GTF3A-202ENST00000419181 CDC20Q12834 499 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 CUL1Q13616 776 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 LY6DQ14210 128 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 TBR1Q16650 682 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.58■□□□□ 0.72
GTF3A-202ENST00000419181 STEAP4Q687X5 459 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 KIAA0408Q6ZU52 694 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 FAM20CQ8IXL6 584 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 RAB42Q8N4Z0 105 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 CD200R1Q8TD46 325 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 GPR21Q99679 349 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 AARSD1Q9BTE6 412 aaKnown RBP19.58■□□□□ 0.72
GTF3A-202ENST00000419181 SPATA7Q9P0W8 599 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 SERTAD3Q9UJW9 196 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 KCND3Q9UK17 655 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 SNX24Q9Y343 169 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 DHRS7Q9Y394 339 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 SEC16AO15027 2179 aa19.58■□□□□ 0.72
GTF3A-202ENST00000419181 FAM187AA6NFU0 413 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 C21orf140B9A014 251 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 E7ESA3 106 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 H3BMH7 237 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 ENO3P13929 434 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-202ENST00000419181 TCN2P20062 427 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 CYP2A7P20853 494 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 MAGP20916 626 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 GABRB3P28472 473 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 RORAP35398 523 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 MC1RQ01726 317 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 DNASE1L3Q13609 305 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 DEFB110Q30KQ9 67 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 FAM199XQ6PEV8 388 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-202ENST00000419181 GALNT7Q86SF2 657 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 SPNS2Q8IVW8 549 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 INPP5DQ92835 1189 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 CFAP36Q96G28 342 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 SEMA4CQ9C0C4 833 aa19.57■□□□□ 0.72
GTF3A-202ENST00000419181 ACTR5Q9H9F9 607 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-202ENST00000419181 TLN1Q9Y490 2541 aaKnown RBP19.57■□□□□ 0.72
GTF3A-202ENST00000419181 E7EQ34 232 aa19.56■□□□□ 0.72
GTF3A-202ENST00000419181 MYO1CO00159 1063 aa19.56■□□□□ 0.72
GTF3A-202ENST00000419181 NDC80O14777 642 aa19.56■□□□□ 0.72
GTF3A-202ENST00000419181 RAD51CO43502 376 aa19.56■□□□□ 0.72
GTF3A-202ENST00000419181 VPS26AO75436 327 aa19.56■□□□□ 0.72
GTF3A-202ENST00000419181 FKBP9O95302 570 aa19.56■□□□□ 0.72
GTF3A-202ENST00000419181 PRKAR1AP10644 381 aa19.56■□□□□ 0.72
GTF3A-202ENST00000419181 ERGP11308 486 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms