RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SYT10Q6XYQ8 523 aa19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 ZNF572Q7Z3I7 529 aaPredicted RBP19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 DNAJC22Q8N4W6 341 aa19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 LRFN5Q96NI6 719 aa19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 FAM167BQ9BTA0 163 aa19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 AARSD1Q9BTE6 412 aaKnown RBP19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 PIEZO2Q9H5I5 2752 aa19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 GPN2Q9H9Y4 310 aaPredicted RBP19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 WDR70Q9NW82 654 aa19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 LNPEPQ9UIQ6 1025 aa19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 VPS9D1Q9Y2B5 631 aa19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 PCDHB3Q9Y5E6 796 aa19.89■□□□□ 0.77
PKNOX1-202ENST00000418336 SMAPO00193 183 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 SCRG1O75711 98 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 TTC4O95801 387 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 RPN2P04844 631 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 CHRM3P20309 590 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 PAFAH1B1P43034 410 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 ARL4DP49703 201 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 FASTKD3Q14CZ7 662 aaKnown RBP19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 KLHL38Q2WGJ6 581 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 CRTC2Q53ET0 693 aaPredicted RBP19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 TMTC4Q5T4D3 741 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 TEDDM1Q5T9Z0 273 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 ZNF385CQ66K41 422 aaPredicted RBP19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 FCRL6Q6DN72 434 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 FAM199XQ6PEV8 388 aaPredicted RBP19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 NEK10Q6ZWH5 1172 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 C2orf73Q8N5S3 287 aaPredicted RBP19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 CALML6Q8TD86 181 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 CT55Q8WUE5 264 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 EXTL1Q92935 676 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 CERS2Q96G23 380 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 SNF8Q96H20 258 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 SYTL2Q9HCH5 934 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 ENAMQ9NRM1 1142 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 KLHL20Q9Y2M5 609 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 DHRS7Q9Y394 339 aa19.88■□□□□ 0.77
PKNOX1-202ENST00000418336 TMEM150CB9EJG8 249 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 MYO1CO00159 1063 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 PFDN6O15212 129 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 RAD51CO43502 376 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 AHSGP02765 367 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 CAPN1P07384 714 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 FURINP09958 794 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 OAS2P29728 719 aaKnown RBP19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 LY6DQ14210 128 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 FRG1Q14331 258 aaKnown RBP19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 CYP2A13Q16696 494 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 HP1BP3Q5SSJ5 553 aaPredicted RBP19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 ATP1A1-AS1Q5TC04 95 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 GALNT7Q86SF2 657 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 RAD51AP1Q96B01 352 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 TCTN2Q96GX1 697 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 NAT9Q9BTE0 207 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 TRIM31Q9BZY9 425 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 PCMTD2Q9NV79 361 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 GRHL1Q9NZI5 618 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 CHMP2BQ9UQN3 213 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 SNX24Q9Y343 169 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 KLK4Q9Y5K2 254 aa19.87■□□□□ 0.77
PKNOX1-202ENST00000418336 ZNF891A8MT65 544 aaPredicted RBP19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 EFCAB8A8MWE9 144 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 CPNE3O75131 537 aaKnown RBP19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 MT-ND3P03897 115 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 CASQ1P31415 396 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 DLSTP36957 453 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 YBX1P67809 324 aaKnown RBP19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 C2orf54Q08AI8 447 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 CDC20Q12834 499 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 CUL1Q13616 776 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 FASTKQ14296 549 aaKnown RBP19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 RBM20Q5T481 1227 aaKnown RBP19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 DUPD1Q68J44 220 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 DSELQ8IZU8 1212 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 PDIK1LQ8N165 341 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 ASB11Q8WXH4 323 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 STARD8Q92502 1023 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 LRRC39Q96DD0 335 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 GPR21Q99679 349 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 MCMBPQ9BTE3 642 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 SPATA7Q9P0W8 599 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 TSR3Q9UJK0 312 aaKnown RBP19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 PADI1Q9ULC6 663 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 COMMD10Q9Y6G5 202 aa19.86■□□□□ 0.77
PKNOX1-202ENST00000418336 SEC16AO15027 2179 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 ISM1B1AKI9 464 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 GFYI3L273 518 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 KDM1AO60341 852 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 MPC1LP0DKB6 136 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 MAGP20916 626 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 PSMB5P28074 263 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 CCNFP41002 786 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 CDKN2DP55273 166 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 DNASE1L3Q13609 305 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 HIF1AQ16665 826 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 DEFB110Q30KQ9 67 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 KIAA0408Q6ZU52 694 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 TAX1BP1Q86VP1 789 aa19.85■□□□□ 0.77
PKNOX1-202ENST00000418336 TMEM126BQ8IUX1 230 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms