RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 WDR60Q8WVS4 1066 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 RUBCNQ92622 972 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ARHGEF2Q92974 986 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 HDAC11Q96DB2 347 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 HMCESQ96FZ2 354 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 LMLNQ96KR4 655 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 TSGA13Q96PP4 275 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 QKIQ96PU8 341 aaKnown RBP eCLIP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 XPO6Q96QU8 1125 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 PRR25Q96S07 402 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 LGMNQ99538 433 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 FEM1AQ9BSK4 669 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 FAM167BQ9BTA0 163 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 TMEM121Q9BTD3 319 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 PABPC3Q9H361 631 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 C10orf88Q9H8K7 445 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 USP29Q9HBJ7 922 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 HPS4Q9NQG7 708 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ITM2CQ9NQX7 267 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 AMACRQ9UHK6 382 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 IPO11Q9UI26 975 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ZNF148Q9UQR1 794 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 MYRFQ9Y2G1 1151 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 DENND4AQ7Z401 1863 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC151A5D8V7 595 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 A8MVJ9 347 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 EFCAB8A8MWE9 144 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 LOC730098B7Z3J9 87 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 J3KR12 359 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 M0R3H8 397 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 SGK1O00141 431 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 AP4M1O00189 453 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 MATN3O15232 486 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 KCNN4O15554 427 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 RAD51CO43502 376 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 KDELR3O43731 214 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 PRAMEF11O60813 436 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 TULP3O75386 442 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 GAS8O95995 478 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 IFNB1P01574 187 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 CISD3P0C7P0 127 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 IL9P15248 144 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 CREB1P16220 341 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 HLA-FP30511 346 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 CD70P32970 193 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 CSKP41240 450 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 GRIA3P42263 894 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 PNLIPRP1P54315 467 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 ARL4CP56559 192 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 E2F1Q01094 437 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 DR1Q01658 176 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 IL10RBQ08334 325 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 LMAN2Q12907 356 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 SLC12A1Q13621 1099 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 DMC1Q14565 340 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 P3H1Q32P28 736 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 ITPRIPL2Q3MIP1 535 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 GLE1Q53GS7 698 aaKnown RBP5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 TMEM196Q5HYL7 178 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC70Q6NSX1 233 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 Q6ZWC4 215 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 GSTA5Q7RTV2 222 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 MAATS1Q7Z4T9 603 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 WDR53Q7Z5U6 358 aaPredicted RBP5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 PEG10Q86TG7 708 aaKnown RBP5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 SLC44A2Q8IWA5 706 aaPredicted RBP5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 ADHFE1Q8IWW8 467 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 SIRT6Q8N6T7 355 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC89Q8N998 374 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 FAM71DQ8N9W8 422 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 CSGALNACT1Q8TDX6 532 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 ACTRT2Q8TDY3 377 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 HTR3CQ8WXA8 447 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 SLCO2A1Q92959 643 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 CTHRC1Q96CG8 243 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 RTP4Q96DX8 246 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 ALG14Q96F25 216 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 WDYHV1Q96HA8 205 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 VPS50Q96JG6 964 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC114Q96M63 670 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 VAT1Q99536 393 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 FERMT1Q9BQL6 677 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 LRRC1Q9BTT6 524 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 TRPV5Q9NQA5 729 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 PRDM8Q9NQV8 689 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 SERTAD4Q9NUC0 356 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 ABCB8Q9NUT2 735 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 GTSE1Q9NYZ3 720 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 THEGQ9P2T0 379 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 GGA2Q9UJY4 613 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 VPS28Q9UK41 221 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 HPCAL4Q9UM19 191 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 OR51B4Q9Y5P0 310 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 DOCK4Q8N1I0 1966 aa5.87□□□□□ -1.47
NIFKP3-201ENST00000417799 NUP205Q92621 2012 aa5.86□□□□□ -1.47
NIFKP3-201ENST00000417799 CXorf51AA0A1B0GTR3 108 aa5.86□□□□□ -1.47
NIFKP3-201ENST00000417799 C5orf60A6NFR6 353 aa5.86□□□□□ -1.47
NIFKP3-201ENST00000417799 ZSCAN5CA6NGD5 496 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms