RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 FLVCR1-AS1Q8TAF5 88 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 MAGEC3Q8TD91 643 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 ASB11Q8WXH4 323 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 KLHL6Q8WZ60 621 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 UBXN4Q92575 508 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 DLG3Q92796 817 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 OR2A14Q96R47 310 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 PKP4Q99569 1192 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 PITPNM3Q9BZ71 974 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 TWSG1Q9GZX9 223 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 KLHL25Q9H0H3 589 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 IKZF3Q9UKT9 509 aa12.07□□□□□ -0.48
SKA1-203ENST00000417656 A0A087WUV0 522 aaPredicted RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 NPEPPSL1A6NEC2 478 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 SLC9B1P1A6NJY1 282 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 CDRT15L2A8MXV6 281 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 ISM1B1AKI9 464 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 GFYI3L273 518 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 RIPK2O43353 540 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 PRAMEF10O60809 474 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 WISP3O95389 354 aaPredicted RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 CAPNS1P04632 268 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 C8GP07360 202 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 EBLN1P0CF75 366 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 ERGP11308 486 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 ST6GAL1P15907 406 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 NELFEP18615 380 aaKnown RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 MAP4P27816 1152 aaKnown RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 PSMB5P28074 263 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 GMPRP36959 345 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 MLLT3P42568 568 aaPredicted RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 FASTKQ14296 549 aaKnown RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 KCNAB1Q14722 419 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 KIR2DS3Q14952 304 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 ZKSCAN8Q15776 578 aaPredicted RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 PHKG1Q16816 387 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 TBC1D25Q3MII6 688 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 ANKS6Q68DC2 871 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 IGF2-ASQ6U949 168 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 TRMT10CQ7L0Y3 403 aaKnown RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 CMC1Q7Z7K0 106 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 CLEC14AQ86T13 490 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 FAM20CQ8IXL6 584 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 LSMEM2Q8N112 164 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 EIF1ADQ8N9N8 165 aaKnown RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 FBXO15Q8NCQ5 510 aaPredicted RBP12.06□□□□□ -0.48
SKA1-203ENST00000417656 ANKRD49Q8WVL7 239 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 USP7Q93009 1102 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 TSPAN17Q96FV3 270 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 SLC41A2Q96JW4 573 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 SLC46A1Q96NT5 459 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 PAFAH2Q99487 392 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 CTRCQ99895 268 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 TXLNGYQ9BZA5 131 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 POPDC3Q9HBV1 291 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 GPAMQ9HCL2 828 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 APMAPQ9HDC9 416 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 THSD1Q9NS62 852 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 SOHLH2Q9NX45 425 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 SLC39A1Q9NY26 324 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 FOXJ2Q9P0K8 574 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 SEMA5BQ9P283 1151 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 DKK4Q9UBT3 224 aa12.06□□□□□ -0.48
SKA1-203ENST00000417656 A0A0J9YY10 115 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 TMEM8BA6NDV4 472 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 B4E171 279 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 C9orf172C9J069 976 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 TLX3O43711 291 aaPredicted RBP12.05□□□□□ -0.48
SKA1-203ENST00000417656 ZBTB14O43829 449 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 ZBTB11O95625 1053 aaPredicted RBP12.05□□□□□ -0.48
SKA1-203ENST00000417656 SLC16A8O95907 504 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 ABHD2P08910 425 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 STMN1P16949 149 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 CYP2A7P20853 494 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 SLC5A2P31639 672 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 TSPAN7P41732 249 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 ARL4DP49703 201 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 RAB10P61026 200 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 VSNL1P62760 191 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 MC2RQ01718 297 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 FOXM1Q08050 763 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 CYP2A13Q16696 494 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 SLC5A12Q1EHB4 618 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 MBOAT1Q6ZNC8 495 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 KMT5CQ86Y97 462 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 CARFQ8N187 725 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 NKAPQ8N5F7 415 aaKnown RBP12.05□□□□□ -0.48
SKA1-203ENST00000417656 C19orf47Q8N9M1 422 aaKnown RBP12.05□□□□□ -0.48
SKA1-203ENST00000417656 PPFIBP2Q8ND30 876 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 HMGCLL1Q8TB92 370 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 RNF31Q96EP0 1072 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 ZNF578Q96N58 590 aaPredicted RBP12.05□□□□□ -0.48
SKA1-203ENST00000417656 TRAPPC9Q96Q05 1148 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 UNKQ9C0B0 810 aaKnown RBP12.05□□□□□ -0.48
SKA1-203ENST00000417656 EPB41L4BQ9H329 900 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 C1GALT1Q9NS00 363 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 PDE10AQ9Y233 779 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 BTRCQ9Y297 605 aa12.05□□□□□ -0.48
SKA1-203ENST00000417656 FREM2Q5SZK8 3169 aa12.04□□□□□ -0.48
SKA1-203ENST00000417656 EXOC1LA0A1B0GW35 172 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms