RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 P2RY12Q9H244 342 aa24.4■■□□□ 1.5
VEGFA-208ENST00000417285 INTS7Q9NVH2 962 aaKnown RBP24.4■■□□□ 1.5
VEGFA-208ENST00000417285 SYBUQ9NX95 663 aa24.4■■□□□ 1.5
VEGFA-208ENST00000417285 ZNF451Q9Y4E5 1061 aa24.4■■□□□ 1.5
VEGFA-208ENST00000417285 PFDN6O15212 129 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 KLF7O75840 302 aaPredicted RBP24.39■■□□□ 1.49
VEGFA-208ENST00000417285 FKBP9O95302 570 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 S1PR4O95977 384 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 IGHEP01854 428 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 RPS3P23396 243 aaKnown RBP eCLIP24.39■■□□□ 1.491e-7■■□□□ 12.2
VEGFA-208ENST00000417285 CD97P48960 835 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 VPS41P49754 854 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 GPS1Q13098 491 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 CHAF1BQ13112 559 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 MLIPQ5VWP3 458 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 ZBTB2Q8N680 514 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 LKAAEAR1Q8TD35 194 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 MAGOHBQ96A72 148 aaKnown RBP24.39■■□□□ 1.49
VEGFA-208ENST00000417285 GBP5Q96PP8 586 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 NDC1Q9BTX1 674 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 RAB11FIP5Q9BXF6 653 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 TXLNGQ9NUQ3 528 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 SLC39A10Q9ULF5 831 aa24.39■■□□□ 1.49
VEGFA-208ENST00000417285 TCRBV7S3A2A0A539 114 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 KRT14P02533 472 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 CBSLP0DN79 551 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 PEBP1P30086 187 aaKnown RBP24.38■■□□□ 1.49
VEGFA-208ENST00000417285 CBSP35520 551 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 TERF1P54274 439 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 UBAP2LQ14157 1087 aaKnown RBP24.38■■□□□ 1.49
VEGFA-208ENST00000417285 KCNJ11Q14654 390 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 DEFB110Q30KQ9 67 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 MRNIPQ6NTE8 343 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 OTOAQ7RTW8 1153 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 KRT222Q8N1A0 295 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 ZNF655Q8N720 491 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-208ENST00000417285 LINC01555Q8NAE3 123 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 OR2L8Q8NGY9 312 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 RAD51AP1Q96B01 352 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 MFSD3Q96ES6 412 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 TCF12Q99081 682 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 MENTQ9BUN1 341 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 IRAK4Q9NWZ3 460 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 EURLQ9NYK6 297 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-208ENST00000417285 SOX13Q9UN79 622 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 PLAAQ9Y263 795 aa24.38■■□□□ 1.49
VEGFA-208ENST00000417285 RASGRF2O14827 1237 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 HCRTR1O43613 425 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 VAPBO95292 243 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 MAGEA6P43360 314 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 C1orf189Q5VU69 101 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 FAM69BQ5VUD6 431 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 MCATQ8IVS2 390 aaKnown RBP24.37■■□□□ 1.49
VEGFA-208ENST00000417285 RAB42Q8N4Z0 105 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 DLG3Q92796 817 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 ZUFSPQ96AP4 578 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 MS4A14Q96JA4 679 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 GRPEL1Q9HAV7 217 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 IFT80Q9P2H3 777 aaPredicted RBP24.37■■□□□ 1.49
VEGFA-208ENST00000417285 NDOR1Q9UHB4 597 aa24.37■■□□□ 1.49
VEGFA-208ENST00000417285 TTLL8A6PVC2 850 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 H3BMM5 538 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 MAGP20916 626 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 CCNFP41002 786 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 ARSFP54793 590 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 MLLT10P55197 1068 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 GRB7Q14451 532 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 SF1Q15637 639 aaKnown RBP24.36■■□□□ 1.49
VEGFA-208ENST00000417285 NKAIN1Q4KMZ8 207 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 ZC3H12BQ5HYM0 836 aaKnown RBP24.36■■□□□ 1.49
VEGFA-208ENST00000417285 RNF187Q5TA31 235 aaPredicted RBP24.36■■□□□ 1.49
VEGFA-208ENST00000417285 TTC27Q6P3X3 843 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 CES3Q6UWW8 571 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 PTERQ96BW5 349 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 FOPNLQ96NB1 174 aa24.36■■□□□ 1.49
VEGFA-208ENST00000417285 TARM1B6A8C7 271 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 PGRMC1O00264 195 aaKnown RBP24.35■■□□□ 1.49
VEGFA-208ENST00000417285 ZNF185O15231 689 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 ZSCAN12O43309 604 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 KLHL41O60662 606 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 DPM1O60762 260 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 PAMP19021 973 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 ARNTP27540 789 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 FOLR3P41439 243 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 KCTD19Q17RG1 926 aaPredicted RBP24.35■■□□□ 1.49
VEGFA-208ENST00000417285 YOD1Q5VVQ6 348 aaPredicted RBP24.35■■□□□ 1.49
VEGFA-208ENST00000417285 KIAA0930Q6ICG6 404 aaPredicted RBP24.35■■□□□ 1.49
VEGFA-208ENST00000417285 OR2Y1Q8NGV0 311 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 MAGEC3Q8TD91 643 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 SKA2Q8WVK7 121 aaPredicted RBP24.35■■□□□ 1.49
VEGFA-208ENST00000417285 FER1L6-AS2Q96M78 137 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 SAMD15Q9P1V8 674 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 DHCR7Q9UBM7 475 aaKnown RBP24.35■■□□□ 1.49
VEGFA-208ENST00000417285 PTRH2Q9Y3E5 179 aaKnown RBP24.35■■□□□ 1.49
VEGFA-208ENST00000417285 NAV2Q8IVL1 2488 aa24.35■■□□□ 1.49
VEGFA-208ENST00000417285 PEX12O00623 359 aa24.34■■□□□ 1.49
VEGFA-208ENST00000417285 PIM1P11309 404 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-208ENST00000417285 OTX2P32243 289 aa24.34■■□□□ 1.49
VEGFA-208ENST00000417285 COILP38432 576 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms