RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 REXO1L1PQ8IX06 675 aa17.21■□□□□ 0.35
CPNE1-210ENST00000416778 ZBTB2Q8N680 514 aa17.21■□□□□ 0.35
CPNE1-210ENST00000416778 LPGAT1Q92604 370 aa17.21■□□□□ 0.35
CPNE1-210ENST00000416778 N4BP2L2Q92802 583 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-210ENST00000416778 SLC22A18Q96BI1 424 aa17.21■□□□□ 0.35
CPNE1-210ENST00000416778 GALPQ9UBC7 116 aa17.21■□□□□ 0.35
CPNE1-210ENST00000416778 SNX7Q9UNH6 387 aa17.21■□□□□ 0.35
CPNE1-210ENST00000416778 PLCL2Q9UPR0 1127 aa17.21■□□□□ 0.35
CPNE1-210ENST00000416778 NFS1Q9Y697 457 aa17.21■□□□□ 0.35
CPNE1-210ENST00000416778 NBASA2RRP1 2371 aa17.21■□□□□ 0.34
CPNE1-210ENST00000416778 ARGFXA6NJG6 315 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 RASGRF2O14827 1237 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 NRDCO43847 1150 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 VPS41P49754 854 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 ADARP55265 1226 aaKnown RBP17.2■□□□□ 0.34
CPNE1-210ENST00000416778 EIF3BP55884 814 aaKnown RBP17.2■□□□□ 0.34
CPNE1-210ENST00000416778 NCF4Q15080 339 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 TMED2Q15363 201 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 TYSND1Q2T9J0 566 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 CCSMST1Q4G0I0 132 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 COLEC12Q5KU26 742 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 CPZQ66K79 652 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 FCRL6Q6DN72 434 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 KIAA0930Q6ICG6 404 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-210ENST00000416778 NEPROQ6NW34 567 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 TLDC1Q6P9B6 456 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 OTOAQ7RTW8 1153 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 ZNF655Q8N720 491 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-210ENST00000416778 TEX19Q8NA77 164 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 MCUQ8NE86 351 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 RAD51AP1Q96B01 352 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 GBP5Q96PP8 586 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 EURLQ9NYK6 297 aa17.2■□□□□ 0.34
CPNE1-210ENST00000416778 SDR42E2A6NKP2 422 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 CEACAM4O75871 244 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 MATN4O95460 622 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 S1PR4O95977 384 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 MLNP12872 115 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 MAGP20916 626 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 PTGIRP43119 386 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 GCGRP47871 477 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 DCDP81605 110 aaKnown RBP17.19■□□□□ 0.34
CPNE1-210ENST00000416778 FOXK1P85037 733 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 CHAF1BQ13112 559 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 GBX1Q14549 363 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 SF1Q15637 639 aaKnown RBP17.19■□□□□ 0.34
CPNE1-210ENST00000416778 ANKRD20A4Q4UJ75 823 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 C1orf189Q5VU69 101 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 MLIPQ5VWP3 458 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 PAPD7Q5XG87 772 aaKnown RBP17.19■□□□□ 0.34
CPNE1-210ENST00000416778 TTC23LQ6PF05 361 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 FIGLAQ6QHK4 219 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 CENPUQ71F23 418 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 ZUFSPQ96AP4 578 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 TRIM56Q9BRZ2 755 aaKnown RBP17.19■□□□□ 0.34
CPNE1-210ENST00000416778 DHRS4Q9BTZ2 278 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 ENAMQ9NRM1 1142 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 DHCR7Q9UBM7 475 aaKnown RBP17.19■□□□□ 0.34
CPNE1-210ENST00000416778 SLC39A10Q9ULF5 831 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 CRYL1Q9Y2S2 319 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 PCDHGA9Q9Y5G4 932 aaKnown RBP17.19■□□□□ 0.34
CPNE1-210ENST00000416778 MED13Q9UHV7 2174 aa17.19■□□□□ 0.34
CPNE1-210ENST00000416778 FAM237BA0A1B0GVD1 139 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 ZSCAN9O15535 394 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-210ENST00000416778 TMEM63AO94886 807 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 ESR1P03372 595 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 GRIA3P42263 894 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 SSPNQ14714 243 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 CCDC137Q6PK04 289 aaKnown RBP17.18■□□□□ 0.34
CPNE1-210ENST00000416778 CILP2Q8IUL8 1156 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 GSDMBQ8TAX9 411 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 HMGCLL1Q8TB92 370 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 PROKR1Q8TCW9 393 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 DENND1AQ8TEH3 1009 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 COG1Q8WTW3 980 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 ACSS2Q9NR19 701 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 SLC22A11Q9NSA0 550 aa17.18■□□□□ 0.34
CPNE1-210ENST00000416778 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-210ENST00000416778 RUVBL2Q9Y230 463 aaKnown RBP17.18■□□□□ 0.34
CPNE1-210ENST00000416778 TARM1B6A8C7 271 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 C9J4A7 227 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 H3BMM5 538 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 PFDN6O15212 129 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 NIPSNAP2O75323 286 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 ONECUT2O95948 504 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 CHRM3P20309 590 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 OGNP20774 298 aaKnown RBP17.17■□□□□ 0.34
CPNE1-210ENST00000416778 RNF187Q5TA31 235 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-210ENST00000416778 MRPL14Q6P1L8 145 aaKnown RBP17.17■□□□□ 0.34
CPNE1-210ENST00000416778 MED25Q71SY5 747 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 AGGF1Q8N302 714 aaeCLIP17.17■□□□□ 0.34
CPNE1-210ENST00000416778 OTUD6BQ8N6M0 293 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 TMEM102Q8N9M5 508 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-210ENST00000416778 ACTRT1Q8TDG2 376 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 ZNF285Q96NJ3 590 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 C17orf62Q9BQA9 187 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 SLC25A23Q9BV35 468 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 KLK4Q9Y5K2 254 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 MRFAP1Q9Y605 127 aa17.17■□□□□ 0.34
CPNE1-210ENST00000416778 RELNP78509 3460 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms