RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 OR4L1Q8NH43 312 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 CFAP61Q8NHU2 1237 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 PRR7Q8TB68 274 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 DENND1AQ8TEH3 1009 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 SLC22A18Q96BI1 424 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 SNRNP40Q96DI7 357 aaKnown RBP13.88□□□□□ -0.19
PAF1-202ENST00000416728 C19orf60Q96EN9 201 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 RANBP9Q96S59 729 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 ILKAPQ9H0C8 392 aaPredicted RBP13.88□□□□□ -0.19
PAF1-202ENST00000416728 ZNF552Q9H707 407 aaPredicted RBP13.88□□□□□ -0.19
PAF1-202ENST00000416728 ETNK1Q9HBU6 452 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.88□□□□□ -0.19
PAF1-202ENST00000416728 KLHL20Q9Y2M5 609 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 PCSK5Q92824 1860 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 SEC16AO15027 2179 aa13.88□□□□□ -0.19
PAF1-202ENST00000416728 A0A1B0GX78 115 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 LIASO43766 372 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 GPC4O75487 556 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 DDAH2O95865 285 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 S1PR4O95977 384 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 APOA4P06727 396 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 UMODP07911 640 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 RNF224P0DH78 156 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 GRIA1P42261 906 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 ARSFP54793 590 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 ACVR1Q04771 509 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 OASLQ15646 514 aaKnown RBP13.87□□□□□ -0.19
PAF1-202ENST00000416728 AARS2Q5JTZ9 985 aaKnown RBP13.87□□□□□ -0.19
PAF1-202ENST00000416728 UNC5DQ6UXZ4 953 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 TTLL10Q6ZVT0 673 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 ZNF534Q76KX8 674 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 NLRP9Q7RTR0 991 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 VRK3Q8IV63 474 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 MCATQ8IVS2 390 aaKnown RBP13.87□□□□□ -0.19
PAF1-202ENST00000416728 ZADH2Q8N4Q0 377 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 CISD2Q8N5K1 135 aaKnown RBP13.87□□□□□ -0.19
PAF1-202ENST00000416728 C2orf73Q8N5S3 287 aaPredicted RBP13.87□□□□□ -0.19
PAF1-202ENST00000416728 FKBP10Q96AY3 582 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 HES6Q96HZ4 224 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 ZNF778Q96MU6 729 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 DESI2Q9BSY9 194 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 CARD6Q9BX69 1037 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 FRMD8P1Q9BZ68 369 aaPredicted RBP13.87□□□□□ -0.19
PAF1-202ENST00000416728 ATP13A2Q9NQ11 1180 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 RAB6BQ9NRW1 208 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 SLC22A11Q9NSA0 550 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 INTS7Q9NVH2 962 aaKnown RBP13.87□□□□□ -0.19
PAF1-202ENST00000416728 ASF1BQ9NVP2 202 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 CIDEBQ9UHD4 219 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 ANAPC5Q9UJX4 755 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 ZNF148Q9UQR1 794 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 TCAF1Q9Y4C2 921 aa13.87□□□□□ -0.19
PAF1-202ENST00000416728 A0A0U1RQJ8 604 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 A1L4Q6 167 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 IQCF5A8MTL0 148 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 AGPSO00116 658 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 MASP2O00187 686 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 PIM1P11309 404 aaPredicted RBP13.86□□□□□ -0.19
PAF1-202ENST00000416728 SOX8P57073 446 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 AIMP2Q13155 320 aaKnown RBP13.86□□□□□ -0.19
PAF1-202ENST00000416728 SEMA3AQ14563 771 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 TMED2Q15363 201 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 NR6A1Q15406 480 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 ZC3H12BQ5HYM0 836 aaKnown RBP13.86□□□□□ -0.19
PAF1-202ENST00000416728 SEL1L2Q5TEA6 688 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 TAX1BP1Q86VP1 789 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 PPHLN1Q8NEY8 458 aaKnown RBP13.86□□□□□ -0.19
PAF1-202ENST00000416728 LKAAEAR1Q8TD35 194 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 PEX13Q92968 403 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 NACC2Q96BF6 587 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 IL17FQ96PD4 163 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 MENTQ9BUN1 341 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 SLC39A10Q9ULF5 831 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 CAPN6Q9Y6Q1 641 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 SHANK1Q9Y566 2161 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 ICE1Q9Y2F5 2266 aa13.86□□□□□ -0.19
PAF1-202ENST00000416728 PRMT5O14744 637 aaPredicted RBP13.85□□□□□ -0.19
PAF1-202ENST00000416728 APRTP07741 180 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 MMP11P24347 488 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 ITGA3P26006 1051 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 GCGRP47871 477 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 ESPL1Q14674 2120 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 GRM7Q14831 915 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 SF1Q15637 639 aaKnown RBP13.85□□□□□ -0.19
PAF1-202ENST00000416728 PTRHD1Q6GMV3 140 aaKnown RBP13.85□□□□□ -0.19
PAF1-202ENST00000416728 TTC23LQ6PF05 361 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 OVCH1Q7RTY7 1134 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 LDB1Q86U70 411 aaPredicted RBP13.85□□□□□ -0.19
PAF1-202ENST00000416728 LURAP1LQ8IV03 231 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 TMEM139Q8IV31 216 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 TMEM151BQ8IW70 566 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 CCDC89Q8N998 374 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 LMNTD1Q8N9Z9 388 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 OR2L8Q8NGY9 312 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 GSDMBQ8TAX9 411 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 RAB11FIP5Q9BXF6 653 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 WDR54Q9H977 334 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 CATSPERZQ9NTU4 200 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 CDC23Q9UJX2 597 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 FBXL4Q9UKA2 621 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms