RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CSE1LP55060 971 aaKnown RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 CDH11P55287 796 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 B3GALT5-AS1P59052 145 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 LETM2Q2VYF4 491 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 SYT14P1Q58G82 188 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 DCAF10Q5QP82 559 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 ELFN2Q5R3F8 820 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 ARMC4Q5T2S8 1044 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 GFI1BQ5VTD9 330 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 KRT80Q6KB66 452 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 CENPVQ7Z7K6 275 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 TMPRSS11BQ86T26 416 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 MAPKAPK5-AS1Q8N8E1 139 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 CCDC191Q8NCU4 936 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 LINC00615Q96LM1 132 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 FNBP1Q96RU3 617 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 TRAF4Q9BUZ4 470 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 LAT2Q9GZY6 243 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 VPS33BQ9H267 617 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 RABEP2Q9H5N1 569 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 CNOT10Q9H9A5 744 aaKnown RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 A4GALTQ9NPC4 353 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 SIX2Q9NPC8 291 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 SLC52A3Q9NQ40 469 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 SDR39U1Q9NRG7 319 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 BCCIPQ9P287 314 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 WDR35Q9P2L0 1181 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 SLC24A2Q9UI40 661 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 PADI2Q9Y2J8 665 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 C2CD2Q9Y426 696 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 CCL27Q9Y4X3 112 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 TRIM17Q9Y577 477 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 CDC42BPBQ9Y5S2 1711 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 CCDC18Q5T9S5 1454 aa3.46□□□□□ -1.86
HMGB1P11-201ENST00000413899 TRIP12Q14669 1992 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 FMN1Q68DA7 1419 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 NEMP2A6NFY4 417 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 TRIM77I1YAP6 450 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 DNM1LO00429 736 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 MEIS2O14770 477 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 CLIC2O15247 247 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 EDIL3O43854 480 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 NADKO95544 446 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 CLPTM1O96005 669 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 PLA2G4BP0C869 781 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 CPT2P23786 658 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 MPZP25189 248 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 MC5RP33032 325 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 RAB28P51157 221 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 DMPKQ09013 629 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 RALGDSQ12967 914 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 P2RY6Q15077 328 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 SPDYCQ5MJ68 293 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 C6orf163Q5TEZ5 329 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 CST9LP1Q5W188 147 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 FAM53AQ6NSI3 398 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 IQCHQ86VS3 1027 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 TTC30BQ8N4P2 665 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 DNAJC22Q8N4W6 341 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 HDAC11Q96DB2 347 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZNF696Q9H7X3 374 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 C5AR2Q9P296 337 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 NFKBIL1Q9UBC1 381 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 NRBP1Q9UHY1 535 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 NCOA2Q15596 1464 aa3.45□□□□□ -1.86
HMGB1P11-201ENST00000413899 KDM5BQ9UGL1 1544 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZCCHC11Q5TAX3 1644 aaKnown RBP3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 TTC37Q6PGP7 1564 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 DENND4BO75064 1496 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 PLOD2O00469 737 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 TADA2AO75478 443 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 EDN1P05305 212 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 CEACAM8P31997 349 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 ASCL1P50553 236 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 ALDH3A2P51648 485 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 CRIP2P52943 208 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 RAD23AP54725 363 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 GNB1P62873 340 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 GPR17Q13304 367 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 PPIGQ13427 754 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 ITGA7Q13683 1181 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 TAF13Q15543 124 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 CA9Q16790 459 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 ITPRIPL2Q3MIP1 535 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 TMEM30BQ3MIR4 351 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZNF876PQ49A33 203 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 MFSD12Q6NUT3 480 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZNF449Q6P9G9 518 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 DET1Q7L5Y6 550 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 TMEM139Q8IV31 216 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 CFAP206Q8IYR0 622 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 PI4KAP1Q8N8J0 262 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZNF383Q8NA42 475 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 SPATA3Q8NHX4 192 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 PHLDA1Q8WV24 401 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 MUS81Q96NY9 551 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 FEVQ99581 238 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 RAD9AQ99638 391 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 RBM4Q9BWF3 364 aaKnown RBP3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 MYNNQ9NPC7 610 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms