RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TAF4O00268 1085 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 TOR1BO14657 336 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SCAMP1O15126 338 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 NVLO15381 856 aaKnown RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SKAP2O75563 359 aaPredicted RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 TJP3O95049 919 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 GAS8O95995 478 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CSF2P04141 144 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 PRKCGP05129 697 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CYP1A2P05177 515 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ENO2P09104 434 aaPredicted RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 GIMD1P0DJR0 217 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 BRAFP15056 766 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 TSHRP16473 764 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ACP1P24666 158 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SERPINA4P29622 427 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SERPINB6P35237 376 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 DUSP3P51452 185 aaPredicted RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 RENBPP51606 427 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CDH6P55285 790 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 AP1S1P61966 158 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 YPEL5P62699 121 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 POLR2LP62875 67 aaKnown RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 MXRA7P84157 204 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 E2F1Q01094 437 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SEMG2Q02383 582 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SLC34A1Q06495 639 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 BCL2L1Q07817 233 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CYP4F3Q08477 520 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 NSUN2Q08J23 767 aaKnown RBP eCLIP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SLC10A7Q0GE19 358 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CALCOCO2Q13137 446 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 EIF2B5Q13144 721 aaKnown RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 TARDBPQ13148 414 aaKnown RBP eCLIP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 LAMB3Q13751 1172 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 PTK6Q13882 451 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 DPYSQ14117 519 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 KRT81Q14533 505 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF235Q14590 738 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 RFTN1Q14699 578 aaPredicted RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 IRF4Q15306 451 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 HADHQ16836 314 aaKnown RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 TPRG1LQ5T0D9 272 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 FAXCQ5TGI0 409 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 HES3Q5TGS1 186 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 TXNRD3NBQ6F5E7 133 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ERAP2Q6P179 960 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 DRICH1Q6PGQ1 229 aaPredicted RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 BRAT1Q6PJG6 821 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CCDC137Q6PK04 289 aaKnown RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 GPR155Q7Z3F1 870 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CAMK1DQ8IU85 385 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CCDC103Q8IW40 242 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 RBFAQ8N0V3 343 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 NIPA2Q8N8Q9 360 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF548Q8NEK5 533 aaPredicted RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF564Q8TBZ8 553 aaPredicted RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 LMX1AQ8TE12 382 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 GRK7Q8WTQ7 553 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 BTN2A2Q8WVV5 523 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SCYL1Q96KG9 808 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 APOLD1Q96LR9 279 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 RMDN2Q96LZ7 410 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 TTC25Q96NG3 672 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF599Q96NL3 588 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CSPG4P5Q96PW8 444 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 PSKH2Q96QS6 385 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 BTBD10Q9BSF8 475 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 DENND2DQ9H6A0 471 aaPredicted RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 PCDH12Q9NPG4 1184 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 MBNL1Q9NR56 388 aaKnown RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ETNK2Q9NVF9 386 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 NKIRAS1Q9NYS0 192 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 NLGN3Q9NZ94 848 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 UVRAGQ9P2Y5 699 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ATXN10Q9UBB4 475 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SPASTQ9UBP0 616 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 DKK4Q9UBT3 224 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SLC24A2Q9UI40 661 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 ZFP69BQ9UJL9 534 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 COQ6Q9Y2Z9 468 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SNX24Q9Y343 169 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 CSNK1G3Q9Y6M4 447 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 COL27A1Q8IZC6 1860 aaPredicted RBP5.23□□□□□ -1.57
LINC00342-201ENST00000412393 FAM208BQ5VWN6 2430 aa5.23□□□□□ -1.57
LINC00342-201ENST00000412393 SPEGQ15772 3267 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.22□□□□□ -1.57
LINC00342-201ENST00000412393 SMIM31A0A1B0GVY4 71 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 TLDC2A0PJX2 215 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 CPED1A4D0V7 1026 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 CFAP69A5D8W1 941 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 TMEM110-MUSTN1A8MSY1 372 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 TPP1O14773 563 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 KLF11O14901 512 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 AQP9O43315 295 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 TYROBPO43914 113 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 PEX1O43933 1283 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 ANXA6P08133 673 aa5.22□□□□□ -1.57
LINC00342-201ENST00000412393 CCDC166P0CW27 439 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms