RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 PVRP15151 417 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 MAP4P27816 1152 aaKnown RBP23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 ARL4DP49703 201 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 FOXM1Q08050 763 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 NAB1Q13506 487 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 SLMAPQ14BN4 828 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 FAM153CQ494X1 144 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 GRTP1Q5TC63 336 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 ANKS6Q68DC2 871 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 CLEC14AQ86T13 490 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 RAB42Q8N4Z0 105 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 DLG3Q92796 817 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 FGF11Q92914 225 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 PKP4Q99569 1192 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 PITPNM3Q9BZ71 974 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 APMAPQ9HDC9 416 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 RAXQ9Y2V3 346 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 ZBTB14O43829 449 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 ZBTB11O95625 1053 aaPredicted RBP23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 ST6GAL1P15907 406 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 SPRP35270 261 aaPredicted RBP23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 SLC12A2P55011 1212 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 POU4F1Q01851 419 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 KIR2DS3Q14952 304 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 FAM20CQ8IXL6 584 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 OR6C1Q96RD1 312 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 CYTH2Q99418 400 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 GPR22Q99680 433 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 SOHLH2Q9NX45 425 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 LNPEPQ9UIQ6 1025 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 ZMIZ1Q9ULJ6 1067 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 PCDHGA7Q9Y5G6 932 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 B3GALT1Q9Y5Z6 326 aa23.05■■□□□ 1.28
UBE2E3-202ENST00000410062 ZFHX4Q86UP3 3567 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 NVLO15381 856 aaKnown RBP23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 EBLN1P0CF75 366 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 MYBL2P10244 700 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 ZNF37AP17032 561 aaPredicted RBP23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 HSD11B2P80365 405 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 ILF2Q12905 390 aaKnown RBP23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 FASTKQ14296 549 aaKnown RBP23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 USP10Q14694 798 aaKnown RBP23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 TMEM164Q5U3C3 297 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 KMT5CQ86Y97 462 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 CARFQ8N187 725 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 FBXO15Q8NCQ5 510 aaPredicted RBP23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 UHMK1Q8TAS1 419 aaKnown RBP23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 TRAPPC9Q96Q05 1148 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 ACSS3Q9H6R3 686 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 FBXO8Q9NRD0 319 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 SPATA7Q9P0W8 599 aa23.04■■□□□ 1.28
UBE2E3-202ENST00000410062 SNRNP200O75643 2136 aaKnown RBP23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 SLU7O95391 586 aaKnown RBP23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 FOLR1P15328 257 aa23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 RAB15P59190 212 aa23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 UAP1Q16222 522 aaPredicted RBP23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 DCAF12Q5T6F0 453 aa23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 D2HGDHQ8N465 521 aa23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 DDA1Q9BW61 102 aa23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 FUT8Q9BYC5 575 aa23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 ANKZF1Q9H8Y5 726 aa23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 GPAMQ9HCL2 828 aa23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 ZZEF1O43149 2961 aa23.03■■□□□ 1.28
UBE2E3-202ENST00000410062 ANKRD11Q6UB99 2663 aaPredicted RBP23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 POLR1CO15160 346 aaPredicted RBP23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 PHGDHO43175 533 aaKnown RBP23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 SLC16A8O95907 504 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 C8GP07360 202 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 PCBP4P57723 403 aaKnown RBP23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 CYP2A13Q16696 494 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 ST3GAL2Q16842 350 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 SNIP1Q8TAD8 396 aaKnown RBP23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 HMGCLL1Q8TB92 370 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 ANKRD49Q8WVL7 239 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 NAF1Q96HR8 494 aaKnown RBP23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 SLC12A9Q9BXP2 914 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 POPDC3Q9HBV1 291 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 SYTL2Q9HCH5 934 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 IKZF3Q9UKT9 509 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 PDE10AQ9Y233 779 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 PCDHGA3Q9Y5H0 932 aa23.02■■□□□ 1.28
UBE2E3-202ENST00000410062 A0A0J9YY10 115 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 ERGP11308 486 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 CYP2A7P20853 494 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 PSMB5P28074 263 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 SP140Q13342 867 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 NKAPQ8N5F7 415 aaKnown RBP23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 PPFIBP2Q8ND30 876 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 SLC22A18Q96BI1 424 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 RNF31Q96EP0 1072 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 TSPAN17Q96FV3 270 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 PDLIM5Q96HC4 596 aaKnown RBP23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 DCBLD2Q96PD2 775 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 ASPSCR1Q9BZE9 553 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 PARVBQ9HBI1 364 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 BTRCQ9Y297 605 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 KLHL20Q9Y2M5 609 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 ANKRD12Q6UB98 2062 aa23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 PRICKLE3O43900 615 aaPredicted RBP23.01■■□□□ 1.27
UBE2E3-202ENST00000410062 STMN1P16949 149 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms