RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 FLVCR1-AS1Q8TAF5 88 aa14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 GABPB2Q8TAK5 448 aaPredicted RBP14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 HMGCLL1Q8TB92 370 aa14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 BIRC8Q96P09 236 aa14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 AKIRIN1Q9H9L7 192 aaPredicted RBP14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 PCMTD2Q9NV79 361 aa14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 SYBUQ9NX95 663 aa14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 MARCH4Q9P2E8 410 aaPredicted RBP14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 TCFL5Q9UL49 500 aa14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 SNX7Q9UNH6 387 aa14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 COMMD10Q9Y6G5 202 aa14.02□□□□□ -0.17
NIF3L1-205ENST00000409588 IQCF5A8MTL0 148 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 KIF5CO60282 957 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 KLHL41O60662 606 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 SRPX2O60687 465 aaPredicted RBP14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 FURINP09958 794 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 PIM1P11309 404 aaPredicted RBP14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 HSD17B2P37059 387 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 RRADP55042 308 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 DCDP81605 110 aaKnown RBP14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 KLRB1Q12918 225 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 TCTE1Q5JU00 501 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 CASC4Q6P4E1 433 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 NAPRTQ6XQN6 538 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 MED25Q71SY5 747 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 PCGF5Q86SE9 256 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 LDB1Q86U70 411 aaPredicted RBP14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 TMEM135Q86UB9 458 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 CAND1Q86VP6 1230 aaKnown RBP14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 CILP2Q8IUL8 1156 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 VRK3Q8IV63 474 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 OTUD6BQ8N6M0 293 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 TMEM102Q8N9M5 508 aaPredicted RBP14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 CFAP61Q8NHU2 1237 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 CALML6Q8TD86 181 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 LPGAT1Q92604 370 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 DLG3Q92796 817 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 MENTQ9BUN1 341 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 CLMPQ9H6B4 373 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 GRPEL1Q9HAV7 217 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 SPHK1Q9NYA1 384 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 IL1RAPL1Q9NZN1 696 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 G3BP2Q9UN86 482 aaKnown RBP14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 PCDHGA9Q9Y5G4 932 aaKnown RBP14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 KLK4Q9Y5K2 254 aa14.01□□□□□ -0.17
NIF3L1-205ENST00000409588 H3BMH7 237 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 MATN4O95460 622 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 C1orf105O95561 183 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 PVRP15151 417 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 CHRM3P20309 590 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 ARNTP27540 789 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 GABRA4P48169 554 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 CSE1LP55060 971 aaKnown RBP14□□□□□ -0.17
NIF3L1-205ENST00000409588 EIF3BP55884 814 aaKnown RBP14□□□□□ -0.17
NIF3L1-205ENST00000409588 DHX34Q14147 1143 aaKnown RBP14□□□□□ -0.17
NIF3L1-205ENST00000409588 SSPNQ14714 243 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 ARHGAP19Q14CB8 494 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 SF1Q15637 639 aaKnown RBP14□□□□□ -0.17
NIF3L1-205ENST00000409588 TRIP13Q15645 432 aaPredicted RBP14□□□□□ -0.17
NIF3L1-205ENST00000409588 ANKRD20A4Q4UJ75 823 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 ATP1A1-AS1Q5TC04 95 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 NEK10Q6ZWH5 1172 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 REXO1L1PQ8IX06 675 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 KRT222Q8N1A0 295 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 ENDOVQ8N8Q3 282 aaKnown RBP14□□□□□ -0.17
NIF3L1-205ENST00000409588 LMNTD1Q8N9Z9 388 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 SKA2Q8WVK7 121 aaPredicted RBP14□□□□□ -0.17
NIF3L1-205ENST00000409588 ANP32BQ92688 251 aaKnown RBP14□□□□□ -0.17
NIF3L1-205ENST00000409588 OSBPL9Q96SU4 736 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 NAT9Q9BTE0 207 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 NDC1Q9BTX1 674 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 FAM60AQ9NP50 221 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 GPN3Q9UHW5 284 aaPredicted RBP14□□□□□ -0.17
NIF3L1-205ENST00000409588 TLK1Q9UKI8 766 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 NEU2Q9Y3R4 380 aa14□□□□□ -0.17
NIF3L1-205ENST00000409588 TCRBV7S3A2A0A539 114 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 ZNF839A8K0R7 811 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 E5RI56 91 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 ZSCAN9O15535 394 aaPredicted RBP13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 PHF2O75151 1096 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 AVILO75366 819 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 USP1O94782 785 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 CAPN1P07384 714 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 PKMP14618 531 aaKnown RBP13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 TCP1P17987 556 aaKnown RBP13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 FMO4P31512 558 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 THOC5Q13769 683 aaKnown RBP13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 GRB7Q14451 532 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 GBX1Q14549 363 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 NCF4Q15080 339 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 ZIC1Q15915 447 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 FAM214AQ32MH5 1076 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 TTLL9Q3SXZ7 439 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 PAPD7Q5XG87 772 aaKnown RBP13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 ZNF385CQ66K41 422 aaPredicted RBP13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 TTC27Q6P3X3 843 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 MICALCLQ6ZW33 695 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 RAB43Q86YS6 212 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 MCATQ8IVS2 390 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms