RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CCR3P51677 355 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 PTGR1Q14914 329 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 ZNF658BQ4V348 819 aaPredicted RBP23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 PIP5KL1Q5T9C9 394 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 LIPJQ5W064 366 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 ARPINQ7Z6K5 226 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 GLB1L3Q8NCI6 653 aaPredicted RBP23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 OR2T34Q8NGX1 318 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 OR2T3Q8NH03 318 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 PKP2Q99959 881 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 BATF3Q9NR55 127 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 INTS7Q9NVH2 962 aaKnown RBP23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 SLAMF8Q9P0V8 285 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 DTNAQ9Y4J8 743 aa23.99■■□□□ 1.43
DNMT3A-206ENST00000406659 VEGFDO43915 354 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 UGDHO60701 494 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 PRAMEF4O60810 478 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 YBX1P67809 324 aaKnown RBP23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 CCSMST1Q4G0I0 132 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 XKR6Q5GH73 641 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 RABL3Q5HYI8 236 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 PRAMEF9Q5VWM5 478 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 FRG2Q64ET8 278 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 ANO7Q6IWH7 933 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 NANOGP8Q6NSW7 305 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 IRGCQ6NXR0 463 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 PRR23BQ6ZRT6 265 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 HID1Q8IV36 788 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 CHPFQ8IZ52 775 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 LILRA2Q8N149 483 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 CATSPER1Q8NEC5 780 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 FGF14Q92915 247 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 DUS3LQ96G46 650 aaKnown RBP23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 HIC2Q96JB3 615 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 FRG2BQ96QU4 278 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 NANOGQ9H9S0 305 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 CIDEBQ9UHD4 219 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 DENND4AQ7Z401 1863 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 RNASEH1O60930 286 aaKnown RBP23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 BCKDHAP12694 445 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 SLC7A1P30825 629 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 EEFSECP57772 596 aaKnown RBP23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 LIPEQ05469 1076 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 AAK1Q2M2I8 961 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 KLHDC8AQ8IYD2 350 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 KIAA2013Q8IYS2 634 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 NUDT8Q8WV74 236 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 CMTM7Q96FZ5 175 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 KCTD14Q9BQ13 255 aaPredicted RBP23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 EFHD1Q9BUP0 239 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 TRIM8Q9BZR9 551 aa23.98■■□□□ 1.43
DNMT3A-206ENST00000406659 SERTM1A2A2V5 107 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 MID1O15344 667 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 RNASEH2AO75792 299 aaKnown RBP23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 POP7O75817 140 aaKnown RBP23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 ZNF8P17098 575 aaPredicted RBP23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 ATP6V1B2P21281 511 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 GRIA3P42263 894 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 GSK3BP49841 420 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 PLOD1Q02809 727 aaPredicted RBP23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 KLC1Q07866 573 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 PWP1Q13610 501 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 USP39Q53GS9 565 aaKnown RBP23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 SUSD1Q6UWL2 747 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 ICA1LQ8NDH6 482 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 LINC00615Q96LM1 132 aaPredicted RBP23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 MUC13Q9H3R2 512 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 ALG2Q9H553 416 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 ACTR3BQ9P1U1 418 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 GULP1Q9UBP9 304 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 EGFL7Q9UHF1 273 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 GPR34Q9UPC5 381 aa23.97■■□□□ 1.43
DNMT3A-206ENST00000406659 C17orf113A0A1B0GUU1 675 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 C1orf105O95561 183 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 SLC16A8O95907 504 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 PRPH2P23942 346 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 MAPK1P28482 360 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 AQP4P55087 323 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 ADAM15Q13444 863 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 KIAA0040Q15053 153 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 CST6Q15828 149 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 CRTC3Q6UUV7 619 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 ADAMTSL4Q6UY14 1074 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 DLEU7Q6UYE1 221 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 IFNEQ86WN2 208 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 PLA2G15Q8NCC3 412 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 FBXO15Q8NCQ5 510 aaPredicted RBP23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 ADCY4Q8NFM4 1077 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 OR56A3Q8NH54 315 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 RPP25Q9BUL9 199 aaKnown RBP23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 LAMA3Q16787 3333 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 IGLON5A6NGN9 336 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 AQP12BA6NM10 295 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 ZNF839A8K0R7 811 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 NPC1O15118 1278 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 PCDH8O95206 1070 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 IL6P05231 212 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 PRPS2P11908 318 aa23.96■■□□□ 1.43
DNMT3A-206ENST00000406659 IMPA1P29218 277 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms