RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 RUNDC3AQ59EK9 446 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 GRASPQ7Z6J2 395 aaPredicted RBP17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ALDH16A1Q8IZ83 802 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 OR2T12Q8NG77 320 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 NCSTNQ92542 709 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 BADQ92934 168 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SCAMP4Q969E2 229 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 DGCR14Q96DF8 476 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ZNF514Q96K75 400 aaPredicted RBP17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 FCRL1Q96LA6 429 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PPM1MQ96MI6 270 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ZSWIM3Q96MP5 696 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ZNF583Q96ND8 569 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 TMEM74Q96NL1 305 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 OR52E6Q96RD3 313 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SLC29A1Q99808 456 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 P2RY13Q9BPV8 354 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 FARSBQ9NSD9 589 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 THEGQ9P2T0 379 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 LINC01553A4QN01 128 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 DEAF1O75398 565 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 H6PDO95479 791 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 NFATC1O95644 943 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CYP17A1P05093 508 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 BMP1P13497 986 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PRPS1L1P21108 318 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 S100A3P33764 101 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ETV3P41162 512 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 DGKQP52824 942 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 TUBA4AP68366 448 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 MYBPC1Q00872 1141 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 HMGCS1Q01581 520 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 HABP4Q5JVS0 413 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 KRT80Q6KB66 452 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 BORAQ6PGQ7 559 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 BEND7Q8N7W2 519 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 BPIFB1Q8TDL5 484 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ZNF707Q96C28 371 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 HHIPQ96QV1 700 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 HBEGFQ99075 208 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ABCG8Q9H221 673 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 RPF2Q9H7B2 306 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 BRF2Q9HAW0 419 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 OBP2AQ9NY56 170 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 TUBA8Q9NY65 449 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 GPRC5BQ9NZH0 403 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ZNHIT2Q9UHR6 403 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CD84Q9UIB8 345 aa17.25■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SLC5A10A0PJK1 596 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PRSS23O95084 383 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SMIM18P0DKX4 95 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 HRH2P25021 359 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ITGB7P26010 798 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 TRPC1P48995 793 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SRSF11Q05519 484 aaKnown RBP17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CHRNB3Q05901 458 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CYP4F3Q08477 520 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 APOFQ13790 326 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PTGR1Q14914 329 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 BCL7AQ4VC05 210 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SYTL3Q4VX76 610 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 MBOAT1Q6ZNC8 495 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 DET1Q7L5Y6 550 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 RIMKLAQ8IXN7 391 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 TMEM132CQ8N3T6 1108 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CBR4Q8N4T8 237 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 NAT16Q8N8M0 369 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PHC3Q8NDX5 983 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ITFG1Q8TB96 612 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CYB5D2Q8WUJ1 264 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ZFAND2BQ8WV99 257 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 AP2M1Q96CW1 435 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ABHD8Q96I13 439 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 THUMPD3Q9BV44 507 aaKnown RBP17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 YTHDF1Q9BYJ9 559 aaKnown RBP17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 GMPR2Q9P2T1 348 aaKnown RBP17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SLC22A14Q9Y267 594 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 MYRFQ9Y2G1 1151 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 COMMD3-BMI1R4GMX3 469 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 NOTCH4Q99466 2003 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 MYOFQ9NZM1 2061 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 TRBV5-3A0A0A0MS03 114 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 EDDM13A0A1B0GTR0 161 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 H0YIV9 168 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 MAP3K13O43283 966 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CTSLP07711 333 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 RETP07949 1114 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CKMT2P17540 419 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CEBPBP17676 345 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 OR4D2P58180 307 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PFN3P60673 137 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 IRF8Q02556 426 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 TMEM115Q12893 351 aaPredicted RBP17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SGO1Q5FBB7 561 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SPANXN4Q5MJ08 99 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 FOXB2Q5VYV0 432 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 NEK5Q6P3R8 708 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 VRK3Q8IV63 474 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ETFBKMTQ8IXQ9 262 aa17.24■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SLC22A15Q8IZD6 547 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms