RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 MED27Q6P2C8 311 aa10.91□□□□□ -0.66
IFT140-202ENST00000397417 LPCAT2Q7L5N7 544 aa10.91□□□□□ -0.66
IFT140-202ENST00000397417 GPR26Q8NDV2 337 aa10.91□□□□□ -0.66
IFT140-202ENST00000397417 HIC2Q96JB3 615 aa10.91□□□□□ -0.66
IFT140-202ENST00000397417 UGT2B28Q9BY64 529 aa10.91□□□□□ -0.66
IFT140-202ENST00000397417 TFB2MQ9H5Q4 396 aaKnown RBP10.91□□□□□ -0.66
IFT140-202ENST00000397417 C1orf109Q9NX04 203 aa10.91□□□□□ -0.66
IFT140-202ENST00000397417 TRIP11Q15643 1979 aa10.91□□□□□ -0.66
IFT140-202ENST00000397417 LRRC72A6NJI9 287 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 MATN2O00339 956 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 SDC3O75056 442 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 PRKACGP22612 351 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 CLDN2P57739 230 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 SH3BP2P78314 561 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 GANABQ14697 944 aaKnown RBP10.9□□□□□ -0.66
IFT140-202ENST00000397417 LYPLAL1Q5VWZ2 237 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 SLC8B1Q6J4K2 584 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 SIX5Q8N196 739 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 MRPL43Q8N983 215 aaKnown RBP10.9□□□□□ -0.66
IFT140-202ENST00000397417 ANKLE1Q8NAG6 615 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 SLC43A3Q8NBI5 491 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 ATP6V1C2Q8NEY4 427 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 SHKBP1Q8TBC3 707 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 ACTRT2Q8TDY3 377 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 NELL1Q92832 810 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 PTCD3Q96EY7 689 aaKnown RBP10.9□□□□□ -0.66
IFT140-202ENST00000397417 AIF1LQ9BQI0 150 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 WDR83Q9BRX9 315 aaKnown RBP10.9□□□□□ -0.66
IFT140-202ENST00000397417 ABCG4Q9H172 646 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 SLC6A17Q9H1V8 727 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 DNMT3BQ9UBC3 853 aaKnown RBP10.9□□□□□ -0.66
IFT140-202ENST00000397417 CEP350Q5VT06 3117 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 CFIP05156 583 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 NT5EP21589 574 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 GABRB3P28472 473 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 PGDP52209 483 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 FOXM1Q08050 763 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 TGM3Q08188 693 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 RAB41Q5JT25 222 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 CHSY3Q70JA7 882 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 CEP68Q76N32 757 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 PHF10Q8WUB8 498 aaKnown RBP10.9□□□□□ -0.66
IFT140-202ENST00000397417 ART5Q96L15 291 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 CNPPD1Q9BV87 410 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 MMADHCQ9H3L0 296 aaPredicted RBP10.9□□□□□ -0.66
IFT140-202ENST00000397417 SRMSQ9H3Y6 488 aa10.9□□□□□ -0.66
IFT140-202ENST00000397417 CPED1A4D0V7 1026 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 ANXA6P08133 673 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 MAOBP27338 520 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 PBX2P40425 430 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 HK2P52789 917 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 MGAT3Q09327 533 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 ADGRE1Q14246 886 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 ZNF678Q5SXM1 525 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 PDE12Q6L8Q7 609 aaKnown RBP10.9□□□□□ -0.67
IFT140-202ENST00000397417 BRAT1Q6PJG6 821 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 CMTR2Q8IYT2 770 aaKnown RBP10.9□□□□□ -0.67
IFT140-202ENST00000397417 FAM9CQ8IZT9 166 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 SLC13A3Q8WWT9 602 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 TSACCQ96A04 125 aaPredicted RBP10.9□□□□□ -0.67
IFT140-202ENST00000397417 VPS35Q96QK1 796 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 STOX2Q9P2F5 926 aaPredicted RBP10.9□□□□□ -0.67
IFT140-202ENST00000397417 PDP2Q9P2J9 529 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 PSME2Q9UL46 239 aa10.9□□□□□ -0.67
IFT140-202ENST00000397417 A0A1W2PQU0 124 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 TRIM43BA6NCK2 446 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 OR52A4PA6NMU1 304 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 VIPR1P32241 457 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 MTHFRP42898 656 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 RPS13P62277 151 aaKnown RBP10.89□□□□□ -0.67
IFT140-202ENST00000397417 PON2Q15165 354 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 TECRLQ5HYJ1 363 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 ALKBH2Q6NS38 261 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 SYVN1Q86TM6 617 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 ISCA2Q86U28 154 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 TCEAL8Q8IYN2 117 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 PGAM4Q8N0Y7 254 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
IFT140-202ENST00000397417 TRIM43Q96BQ3 446 aaPredicted RBP10.89□□□□□ -0.67
IFT140-202ENST00000397417 PRICKLE1Q96MT3 831 aaPredicted RBP10.89□□□□□ -0.67
IFT140-202ENST00000397417 MARCH7Q9H992 704 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 POLR1BQ9H9Y6 1135 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 ATAD3AQ9NVI7 634 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 NLE1Q9NVX2 485 aaPredicted RBP10.89□□□□□ -0.67
IFT140-202ENST00000397417 KLHL28Q9NXS3 571 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 FEZF1A0PJY2 475 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 ERI3O43414 337 aaKnown RBP10.89□□□□□ -0.67
IFT140-202ENST00000397417 CD1DP15813 335 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 MAGP20916 626 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 CST5P28325 142 aaPredicted RBP10.89□□□□□ -0.67
IFT140-202ENST00000397417 CAMKK1Q8N5S9 505 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 ENDOVQ8N8Q3 282 aaKnown RBP10.89□□□□□ -0.67
IFT140-202ENST00000397417 NUDT8Q8WV74 236 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 SMARCD2Q92925 531 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 RAB8BQ92930 207 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 KIAA1191Q96A73 305 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 LOXHD1Q8IVV2 1947 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 ANKRD31Q8N7Z5 1873 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 PCDH7O60245 1069 aa10.89□□□□□ -0.67
IFT140-202ENST00000397417 CSTF3Q12996 717 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms