RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 OR13C4Q8NGS5 318 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 DENND1AQ8TEH3 1009 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 INPP5DQ92835 1189 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 LRRC45Q96CN5 670 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 PPP1R2P1Q96PQ5 205 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 OR2A14Q96R47 310 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 NDC1Q9BTX1 674 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 KLHL25Q9H0H3 589 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 FAM96AQ9H5X1 160 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 XKR8Q9H6D3 395 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 TXLNGQ9NUQ3 528 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 SPTLC3Q9NUV7 552 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 OR6C2Q9NZP2 312 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 EFR3BQ9Y2G0 817 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.44□□□□□ -1.06
CAPN3-208ENST00000397204 SETD2Q9BYW2 2564 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 MDC1Q14676 2089 aaKnown RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 SERTM1A2A2V5 107 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 H7C0S8 307 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 AGPSO00116 658 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 LIN7AO14910 233 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ZSCAN9O15535 394 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 CBFA2T2O43439 604 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 KDM1AO60341 852 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ZNF189O75820 626 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 STK10O94804 968 aaKnown RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ONECUT2O95948 504 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ALBP02768 609 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 UMODP07911 640 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 PIM1P11309 404 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 UGT2B7P16662 529 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ACRV1P26436 265 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ACADLP28330 430 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 MC4RP32245 332 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ZNF140P52738 457 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ARSFP54793 590 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 PER3P56645 1201 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 PLOD1Q02809 727 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ZIC1Q15915 447 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 SLC5A12Q1EHB4 618 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ANKRD20A2Q5SQ80 823 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ANKRD20A1Q5TYW2 823 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 C1orf189Q5VU69 101 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ANKRD20A3Q5VUR7 823 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 C1QL3Q5VWW1 255 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 IGFL2Q6UWQ7 119 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 TAS2R42Q7RTR8 314 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 OVCH1Q7RTY7 1134 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 PPP1R32Q7Z5V6 425 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 CUZD1Q86UP6 607 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 KCNMB4Q86W47 210 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 SERPINA9Q86WD7 417 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 TMTC1Q8IUR5 882 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 CCDC50Q8IVM0 306 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 TBC1D21Q8IYX1 336 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 DNAJC22Q8N4W6 341 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 CLDN19Q8N6F1 224 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 DLG3Q92796 817 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 VPS50Q96JG6 964 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 NRTNQ99748 197 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 WDR77Q9BQA1 342 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 APOL2Q9BQE5 337 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 GORASP1Q9BQQ3 440 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 HGH1Q9BTY7 390 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 HEMGNQ9BXL5 484 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ZBTB20Q9HC78 741 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ABHD10Q9NUJ1 306 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 PLCL2Q9UPR0 1127 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ICKQ9UPZ9 632 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 CDYLQ9Y232 598 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 ASF1AQ9Y294 204 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 NTNG1Q9Y2I2 539 aa8.43□□□□□ -1.06
CAPN3-208ENST00000397204 SVILO95425 2214 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 A0A0J9YY10 115 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 SYCE3A1L190 88 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 LRRTM2O43300 516 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 HNRNPRO43390 633 aaKnown RBP8.42□□□□□ -1.06
CAPN3-208ENST00000397204 HCRTR1O43613 425 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 CNOT3O75175 753 aaKnown RBP8.42□□□□□ -1.06
CAPN3-208ENST00000397204 AP2A1O95782 977 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 CHRM5P08912 532 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-208ENST00000397204 EDN3P14138 238 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 ALAS2P22557 587 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 MMP11P24347 488 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 ITGA3P26006 1051 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 TNFRSF8P28908 595 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 NSG1P42857 185 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 TSFMP43897 325 aaKnown RBP8.42□□□□□ -1.06
CAPN3-208ENST00000397204 CDKN1CP49918 316 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-208ENST00000397204 TMPRSS15P98073 1019 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 CACNG1Q06432 222 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 KIR2DS3Q14952 304 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 CCDC181Q5TID7 509 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 AGAP7PQ5VUJ5 663 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 IRAK1BP1Q5VVH5 260 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 PRAMEF13Q5VWM6 474 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 FIGNL1Q6PIW4 674 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 TRIM73Q86UV7 250 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 KLHDC8BQ8IXV7 354 aa8.42□□□□□ -1.06
CAPN3-208ENST00000397204 SRRM1Q8IYB3 904 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms